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Diffusive molecular communication (DMC) is envisioned as a promising approach to help realize healthcare applications within bounded biological environments. In this paper, a DMC system within a biological spherical environment is…

Signal Processing · Electrical Eng. & Systems 2018-11-15 Hamidreza Arjmandi , Mohammad Zoofaghari , Adam Noel

Accurate and robust spatial orders are ubiquitous in living systems. In 1952, Alan Turing proposed an elegant mechanism for pattern formation based on spontaneous breaking of the spatial translational symmetry in the underlying…

Statistical Mechanics · Physics 2022-06-07 Dongliang Zhang , Chenghao Zhang , Qi Ouyang , Yuhai Tu

Inspired by active shape morphing in developing tissues and biomaterials, we investigate two generic mechanochemical models where the deformations of a thin elastic sheet are driven by, and in turn affect, the concentration gradients of a…

Soft Condensed Matter · Physics 2021-07-14 Andrei Zakharov , Kinjal Dasbiswas

In this letter, we propose a new molecular modulation scheme for nanonetworks. To evaluate the scheme we introduce a more realistic system model for molecule dissemination and propagation processes based on the Poisson distribution. We…

Information Theory · Computer Science 2012-09-26 Hamidreza Arjmandi , Amin Gohari , Masoume Nasiri Kenari , Farshid Bateni

Mathematical modeling is now used commonly in the analysis of signaling networks. With advances in high resolution microscopy, the spatial location of different signaling molecules and the spatio-temporal dynamics of signaling microdomains…

Subcellular Processes · Quantitative Biology 2016-07-26 Jasmine Nirody , Padmini Rangamani

In diffusion-based molecular communication, information is transferred from a transmitter to a receiver using molecular carriers. The low achievable data rate is the main disadvantage of diffusion-based molecular over radio-based…

Emerging Technologies · Computer Science 2018-09-18 Tayyebeh Jahani-Nezhad , Foroogh S. Tabataba

Assembly theory predicts that a distinguishing signature of life is its ability to produce complex molecules in abundance, opening new possibilities for life detection. Experimental validation of this approach has so far relied on abiotic…

Biological Physics · Physics 2025-09-08 Alexandre Champagne-Ruel , Christopher P. Kempes , Cole Mathis

Spatial pattern formation is a key feature of many natural systems in physics, chemistry and biology. The essential theoretical issue in understanding pattern formation is to explain how a spatially homogeneous initial state can undergo…

Pattern Formation and Solitons · Physics 2015-06-04 Timothy Killingback , Gregory Loftus , Bala Sundaram

Many mathematical models describing vegetation patterns are based on biomass--water interactions, due to the impact of this limited resource in arid and semi-arid environments. However, in recent years, a novel biological factor called…

Dynamical Systems · Mathematics 2026-04-20 Francesco Giannino , Annalisa Iuorio , Cinzia Soresina

We explain the principles of gene expression pattern stabilization in systems of interacting, diffusible morphogens, with dynamically established source regions. Using a reaction-diffusion model with step-function production term, we…

Biological Physics · Physics 2023-03-02 M. Majka , R. D. J. G. Ho , M. Zagorski

Diffusion-based and neural communication are two interesting domains in molecular communication. Both of them have distinct advantages and are exploited separately in many works. However, in some cases, neural and diffusion-based ways have…

Emerging Technologies · Computer Science 2015-07-07 Peng He , Yuming Mao , Qiang Liu , Kun Yang

In diffusion-based molecular communication (DMC), one important functionality of a transmitter nano-machine is signal modulation. In particular, the transmitter has to be able to control the release of signaling molecules for modulation of…

Emerging Technologies · Computer Science 2016-04-20 Hamidreza Arjmandi , Arman Ahmadzadeh , Robert Schober , Masoumeh Nasiri Kenari

In this paper, a cooperative diffusion-based molecular communication system is considered where distributed receivers collaboratively determine a transmitter's signal. In this system, the receivers first make local hard decisions about the…

Information Theory · Computer Science 2017-03-20 Yuting Fang , Adam Noel , Nan Yang , Andrew W. Eckford , Rodney A. Kennedy

Pattern formation, arising from systems of autonomous reaction-diffusion equations, on networks has become a common topic of study in the scientific literature. In this work we focus primarily on directed networks. Although some work prior…

Pattern Formation and Solitons · Physics 2022-10-19 Joshua Ritchie

Since its foundations, more than one hundred years ago, the field of structural biology has strived to understand and analyze the properties of molecules and their interactions by studying the structure that they take in 3D space. However,…

Biomolecules · Quantitative Biology 2023-02-27 Gabriele Corso

In this work, we present the development of a neuro-inspired approach for characterizing sensorimotor relations in robotic systems. The proposed method has self-organizing and associative properties that enable it to autonomously obtain…

Robotics · Computer Science 2019-05-02 Omar Zahra , David Navarro-Alarcon

Molecular communication (MC) is a kind of communication technology based on biochemical molecules for internet of bio-nano things, in which the biochemical molecule is used as the information carrier for the interconnection of nano-devices.…

Information Theory · Computer Science 2017-09-15 Jiaxing Wang , Bonan Yin , Mugen Peng

In this paper, we present a communication protocol between a pair of biological nanomachines, transmitter and receiver, built upon molecular communications in an aqueous environment. In our proposal, the receiver, acting as a control node,…

Emerging Technologies · Computer Science 2016-11-17 Luca Felicetti , Mauro Femminella , Gianluca Reali , Tadashi Nakano , Athanasios V. Vasilakos

Reaction-diffusion systems have been widely used to study spatio-temporal phenomena in cell biology, such as cell polarization. Coupled bulk-surface models naturally include compartmentalization of cytosolic and membrane-bound polarity…

Pattern Formation and Solitons · Physics 2020-08-11 Frédéric Paquin-Lefebvre , Bin Xu , Kelsey L. DiPietro , Alan E. Lindsay , Alexandra Jilkine

In this paper, we present an analytical model for the diffusive molecular communication (MC) system with a reversible adsorption receiver in a fluid environment. The widely used concentration shift keying (CSK) is considered for modulation.…

Emerging Technologies · Computer Science 2016-06-23 Yansha Deng , Adam Noel , Maged Elkashlan , Arumugam Nallanathan , Karen C. Cheung