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Biological systems are typically very complex and need to be reduced before they are amenable to a thorough analysis. Also, they often possess functionally important dynamic features like bistability. In model reduction, it is sometimes…

Molecular Networks · Quantitative Biology 2007-05-23 Steffen Waldherr , Thomas Eissing , Madalena Chaves , Frank Allgower

The synthetic construction of intracellular circuits is frequently hindered by a poor knowledge of appropriate kinetics and precise rate parameters. Here, we use generalized modeling (GM) to study the dynamical behavior of topological…

Molecular Networks · Quantitative Biology 2013-05-15 Ed Reznik , Tasso J. Kaper , Daniel Segre

Recently developed techniques to acquire high-quality human mobility data allow large-scale simulations of the spread of infectious diseases with high spatial and temporal resolution.Analysis of such data has revealed the oversimplification…

Physics and Society · Physics 2015-12-08 Naoya Fujiwara , Abhijeet R. Sonawane , Koji Iwayama , Kazuyuki Aihara

Yet often neglected, dynamical interdependencies between concomitant contagion processes can alter their intrinsic equilibria and bifurcations. A particular case of interest for disease control is the emergence of explosive transitions in…

Physics and Society · Physics 2023-12-04 Santiago Lamata-Otín , Jesús Gómez-Gardeñes , David Soriano-Paños

This paper presents a general framework to derive the weakly nonlinear stability near a Hopf bifurcation in a special class of multi-scale reaction-diffusion equations. The main focus is on how the linearity and nonlinearity of the fast…

Dynamical Systems · Mathematics 2024-07-09 Ji Li , Qing Yu , Qian Zhang

The provision of additional food (AF) sources to an introduced predator has been identified as a mechanism to improve pest control. However, AF models with prey dependent functional responses can cause unbounded growth of the predator…

Dynamical Systems · Mathematics 2023-12-20 Sureni Wickramasooriya , Jonathan Martin , Aniket Banerjee , Rana D. Parshad

In this paper, we study the classical two-predators-one-prey model. The classical model described by a system of 3 ordinary differential equations can be reduced to a one-dimensional bimodal map. We prove that this map has at most two…

Dynamical Systems · Mathematics 2021-09-08 Sergey Kryzhevich , Viktor Avrutin , Gunnar Söderbacka

Interfaces in two-dimensional systems exhibit unexpected complex dynamical behaviors, the dynamics of a border connecting a stripe pattern and a uniform state is studied. Numerical simulations of a prototype isotropic model, the subcritical…

Pattern Formation and Solitons · Physics 2008-06-05 Marcel G. Clerc , Daniel Escaff , Rene Rojas

We study the two state model which describes the balance equation for carbon dioxide and oxygen. These are nonlinear parameter dependent and because of the transport delay in the respiratory control system, they are modeled with delay…

Dynamical Systems · Mathematics 2022-06-29 Nirjal Sapkota , Janos Turi

Traveling wavetrains in generalized two-species predator-prey models and two-component reaction-diffusion equations are considered. The stability of the fixed points of the traveling wave ODEs (in the usual "spatial" variable) is…

Dynamical Systems · Mathematics 2015-10-01 Stefan C. Mancas , Roy S. Choudhury

A simple electronic circuit with a voltage controlled current source is investigated. The circuit exhibits rich dynamics upon varying the circuit elements such as L,C and R, and the control factor of the current source. Among several other…

Adaptation and Self-Organizing Systems · Physics 2017-05-22 Debdipta Goswami , Subhankar Ray

We consider a model proposed earlier by us for describing a form of plastic instability found in creep experiments . The model consists of three types of dislocations and some transformations between them. The model is known to reproduce a…

chao-dyn · Physics 2015-06-24 Mulugeta Bekele , G Ananthakrishna

We investigate a model for spatial epidemics explicitly taking into account bi-directional movements between base and destination locations on individual mobility networks. We provide a systematic analysis of generic dynamical features of…

Physics and Society · Physics 2012-03-07 Vitaly Belik , Theo Geisel , Dirk Brockmann

The biased interaction game described the operation of systems rooted in boundedly rational interactions under conditions of scarcity. The game explored the influence of bias and demonstrated how hierarchy and inequality are emergent system…

Computer Science and Game Theory · Computer Science 2026-03-10 Phil Mercy , Martin Neil

This paper presents an investigation of the dynamics of two coupled non-identical FitzHugh-Nagumo neurons with quadratic term and delayed synaptic connection. We consider coupling strength and time delay as bifurcation parameters, and try…

Chaotic Dynamics · Physics 2016-02-29 Niloofar Farajzadeh Tehrani , MohammadReza Razvan

We discuss the transition paths in a coupled bistable system consisting of interacting multiple identical bistable motifs. We propose a simple model of coupled bistable gene circuits as an example, and show that its transition paths are…

Molecular Networks · Quantitative Biology 2016-11-03 Chengzhe Tian , Namiko Mitarai

Hopf bifurcations are a universal route to self-sustained oscillations in driven systems. Despite the absence of any singular stationary state, we show that time-averaged observables generically exhibit singularities at the onset of…

Statistical Mechanics · Physics 2026-05-11 Benedikt Remlein , Massimiliano Esposito

The spatio-temporal arrangement of interacting populations often influences the maintenance of species diversity and is a subject of intense research. Here, we study the spatio-temporal patterns arising from the cyclic competition between…

Populations and Evolution · Quantitative Biology 2014-09-10 Bartosz Szczesny , Mauro Mobilia , Alastair M. Rucklidge

In this paper, we investigate a delayed reaction-diffusion-advection equation, which models the population dynamics in the advective heterogeneous environment. The existence of the nonconstant positive steady state and associated Hopf…

Dynamical Systems · Mathematics 2018-07-23 Shanshan Chen , Junjie Wei , Xue Zhang

We study the tipping point collective dynamics of an adaptive susceptible-infected-susceptible (SIS) epidemiological network in a data-driven, machine learning-assisted manner. We identify a parameter-dependent effective stochastic…

Machine Learning · Computer Science 2023-11-14 Nikolaos Evangelou , Tianqi Cui , Juan M. Bello-Rivas , Alexei Makeev , Ioannis G. Kevrekidis