Related papers: Tabulation of Noncrossing Acyclic Digraphs
A graph is an opposition graph, respectively, a coalition graph, if it admits an acyclic orientation which puts the two end-edges of every chordless 4-vertex path in opposition, respectively, in the same direction. Opposition and coalition…
Graphlet analysis is an approach to network analysis that is particularly popular in bioinformatics. We show how to set up a system of linear equations that relate the orbit counts and can be used in an algorithm that is significantly…
A non-crossing pairing on a bitstring matches 1s and 0s in a manner such that the pairing diagram is nonintersecting. By considering such pairings on arbitrary bitstrings $1^{n_1} 0^{m_1} ... 1^{n_r} 0^{m_r}$, we generalize classical…
Comparability graphs are a popular class of graphs. We introduce as the digraph analogue of comparability graphs the class of comparability digraphs. We show that many concepts such as implication classes and the knotting graph for a…
An algorithm is presented for the computation of the topology of a non-reduced space curve defined as the intersection of two implicit algebraic surfaces. It computes a Piecewise Linear Structure (PLS) isotopic to the original space curve.…
Bipartite Correlation clustering is the problem of generating a set of disjoint bi-cliques on a set of nodes while minimizing the symmetric difference to a bipartite input graph. The number or size of the output clusters is not constrained…
Hierarchical graph clustering is a common technique to reveal the multi-scale structure of complex networks. We propose a novel metric for assessing the quality of a hierarchical clustering. This metric reflects the ability to reconstruct…
Hypergraphs extend traditional networks by capturing multi-way or group interactions. Given the complexity of hypergraph data and the wide range of methodology available for pairwise network analysis, hypergraph data is often projected onto…
A connected digraph in which the in-degree of any vertex equals its out-degree is Eulerian; this baseline result is used as the basis of existence proofs for universal cycles (also known as ucycles or generalized deBruijn cycles or…
The guessing number of a directed graph (digraph), equivalent to the entropy of that digraph, was introduced as a direct criterion on the solvability of a network coding instance. This paper makes two contributions on the guessing number.…
Many polynomial invariants are defined on graphs for encoding the combinatorial information and researching them algebraically. In this paper, we introduce the cycle polynomial and the path polynomial of directed graphs for counting cycles…
Neural networks that compute over graph structures are a natural fit for problems in a variety of domains, including natural language (parse trees) and cheminformatics (molecular graphs). However, since the computation graph has a different…
The monography considers the problem of constructing a Hamiltonian cycle in a complete graph. A rule for constructing a Hamiltonian cycle based on isometric cycles of a graph is established. An algorithm for constructing a Hamiltonian cycle…
We address the problem of learning the topology of directed acyclic graphs (DAGs) from nodal observations, which adhere to a linear structural equation model. Recent advances framed the combinatorial DAG structure learning task as a…
Many problems can be presented in an abstract form through a wide range of binary objects and relations which are defined over problem domain. In these problems, graphical demonstration of defined binary objects and solutions is the most…
Graphs are commonly used to represent and visualize causal relations. For a small number of variables, this approach provides a succinct and clear view of the scenario at hand. As the number of variables under study increases, the graphical…
This paper presents a new graph isomorphism invariant, called $\mathfrak{w}$-labeling, that can be used to design a polynomial-time algorithm for solving the graph isomorphism problem for various graph classes. For example, all…
In this paper algebraic and combinatorial properties and a computation of the number of the spanning trees are developed for certain graphs. To this purpose, an original method, independent of the spectrum of the Laplacian matrix associated…
A directed acyclic graph G = (V, E) is pseudo-transitive with respect to a given subset of edges E1, if for any edge ab in E1 and any edge bc in E, we have ac in E. We give algorithms for computing longest chains and demonstrate geometric…
We propose geometrical methods for constructing square 01-matrices with the same number n of units in every row and column, and such that any two rows of the matrix contain at most one unit in common. These matrices are equivalent to…