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We explore a case example of networks of classical electronic oscillators evolving towards the solution of complex optimization problems. We show that when driven into subharmonic response, a network of such nonlinear electrical resonators…

Pattern Formation and Solitons · Physics 2022-04-04 L. Q. English , A. V. Zampetaki , K. P. Kalinin , N. G. Berloff , P. G. Kevrekidis

Long-range synchrony from short-range interactions is a familiar pattern in biological and physical systems, many of which share a common set of ``universal'' properties at the point of synchronization. Common biological systems of coupled…

Statistical Mechanics · Physics 2021-06-14 Vahini Reddy Nareddy , Jonathan Machta , Karen C Abbott , Shadisadat Esmaeili , Alan Hastings

We analyze a non-Markovian mean field interacting spin system, related to the Curie--Weiss model. We relax the Markovianity assumption by replacing the memoryless distribution of the waiting times of a classical spin-flip dynamics with a…

Probability · Mathematics 2019-11-14 Paolo Dai Pra , Marco Formentin , Guglielmo Pelino

A theoretical framework is developed for a precise control of spatial patterns in oscillatory media using nonlinear global feedback, where a proper form of the feedback function corresponding to a specific pattern is predicted through the…

Pattern Formation and Solitons · Physics 2009-11-13 Yasuaki Kobayashi , Hiroshi Kori

The genetic repressilator circuit consists of three transcription factors, or repressors, which negatively regulate each other in a cyclic manner. This circuit was synthetically constructed on plasmids in {\it Escherichia coli} and was…

Molecular Networks · Quantitative Biology 2009-11-13 Adiel Loinger , Ofer Biham

In the present work, we consider nonlinear control systems for which there exist structural obstacles to the design of classical continuous backstepping feedback laws. We conceive feedback laws such that the origin of the closed-loop system…

Optimization and Control · Mathematics 2015-08-12 Humberto Stein Shiromoto , Vincent Andrieu , Christophe Prieur

Feedback loops are major components of biochemical systems. Many systems show multiple such (positive or negative) feedback loops. Nevertheless, very few quantitative analyses address the question how such multiple feedback loops evolved.…

Quantitative Methods · Quantitative Biology 2010-03-08 M. Hafner , H. Koeppl , A. Wagner

We introduce and analyse the kinetic random-field nonreciprocal Ising model, which incorporates bimodal (double-delta) diffusive disorder along with pairwise nonreciprocal interactions between two different species. Using mean-field and…

Statistical Mechanics · Physics 2026-03-09 Arjun R , A. V. Anil Kumar

Theoretical studies of synchronization are usually based on models of coupled phase oscillators which, when isolated, have constant angular frequency. Stochastic discrete versions of these uniform oscillators have also appeared in the…

Data Analysis, Statistics and Probability · Physics 2012-01-30 Vladimir R. V. Assis , Mauro Copelli

For cellular biochemical reaction systems where the numbers of molecules is small, significant noise is associated with chemical reaction events. This molecular noise can give rise to behavior that is very different from the predictions of…

Molecular Networks · Quantitative Biology 2009-11-13 Matthew Scott , Terence Hwa , Brian Ingalls

Optimal nonlinear damping control was recently introduced for the second-order SISO systems, showing some advantages over a classical PD feedback controller. This paper summarizes the main theoretical developments and properties of the…

Systems and Control · Electrical Eng. & Systems 2022-08-09 Michael Ruderman

Many biological systems can sense periodical variations in a stimulus input and produce well-timed, anticipatory responses after the input is removed. Such systems show memory effects for retaining timing information in the stimulus and…

Neurons and Cognition · Quantitative Biology 2015-09-09 Ying-Jen Yang , Chun-Chung Chen , Pik-Yin Lai , C. K. Chan

Hybrid oscillator architectures that combine feedback oscillators with self-sustained negative resistance oscillators have emerged as a promising platform for artificial neuron design. In this work, we introduce a modeling and analysis…

Chemical Physics · Physics 2025-08-04 Gonzalo Rivera-Sierra , Roberto Fenollosa , Juan Bisquert

The dynamical Ising model under the effect of the amplitude modulated time dependent periodic magnetic field has been solved by using EFT with Glauber type of stochastic process. Several cases with amplitude modulation have been…

Statistical Mechanics · Physics 2019-06-26 Ümit Akıncı

This note studies the robust output feedback stabilization problem of a class of multi-input multi-output invertible nonlinear systems, for which an "ideal" state feedback based on feedback linearization can be designed under certain mild…

Systems and Control · Electrical Eng. & Systems 2021-01-07 Lei Wang , Christopher M. Kellett

The central question of systems biology is to understand how individual components of a biological system such as genes or proteins cooperate in emerging phenotypes resulting in the evolution of diseases. As living cells are open systems in…

Quantitative Methods · Quantitative Biology 2019-08-20 Jeyashree Krishnan , Reza Torabi , Edoardo Di Napoli , Andreas Schuppert

The Ising model doesn't have a strictly defined dynamics, only a spectrum. There are different ways to equip it with a time dependence e.g. the Glauber or the Kawasaki dynamics, which are both stochastic, but it means there is a master…

Statistical Mechanics · Physics 2021-09-07 Máté Tibor Veszeli , Gábor Vattay

Recently, interesting non-monotonic time evolution has been pointed out in the experiments by J\"onsson, {\it et al.} and Jonsson {\it et.al.} and also in the numerical simulation by Takayama and Hukushima where the magnetic susceptibility…

Statistical Mechanics · Physics 2007-08-13 Seiji Miyashita , Shu Tanaka , Masaki Hirano

The entropic sampling dynamics based on the reversible information transfer to and from the environment is applied to the globally coupled Ising model in the presence of an oscillating magnetic field. When the driving frequency is low…

Statistical Mechanics · Physics 2007-05-23 Beom Jun Kim , M. Y. Choi

As a paradigmatic model of open quantum system, the spin-boson model is widely used in theoretical and experimental investigations. Beyond the weak coupling limit, the spin dynamics can be described by a time-nonlocal generalized master…

Statistical Mechanics · Physics 2018-08-10 L. Magazzù , S. Denisov , P. Hänggi