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Graphs have a superior ability to represent relational data, like chemical compounds, proteins, and social networks. Hence, graph-level learning, which takes a set of graphs as input, has been applied to many tasks including comparison,…

Machine Learning · Computer Science 2023-05-26 Zhenyu Yang , Ge Zhang , Jia Wu , Jian Yang , Quan Z. Sheng , Shan Xue , Chuan Zhou , Charu Aggarwal , Hao Peng , Wenbin Hu , Edwin Hancock , Pietro Liò

Many real-world domains can be expressed as graphs and, more generally, as multi-relational knowledge graphs. Though reasoning and learning with knowledge graphs has traditionally been addressed by symbolic approaches, recent methods in…

Artificial Intelligence · Computer Science 2020-03-25 Sebastijan Dumancic , Alberto Garcia-Duran , Mathias Niepert

We give complete presentations for the dagger-compact props of affine Lagrangian and coisotropic relations over an arbitrary field. This provides a unified family of graphical languages for both affinely constrained classical mechanical…

Logic in Computer Science · Computer Science 2024-03-19 Robert I. Booth , Titouan Carette , Cole Comfort

We propose a new formalism for specifying and reasoning about problems that involve heterogeneous "pieces of information" -- large collections of data, decision procedures of any kind and complexity and connections between them. The essence…

Logic in Computer Science · Computer Science 2016-12-30 Eugenia Ternovska

Graphs are an intuitive way to represent relationships between variables in fields such as finance and neuroscience. However, these graphs often need to be inferred from data. In this paper, we propose a novel framework to infer a latent…

Methodology · Statistics 2024-10-25 Jedidiah Harwood , Debashis Paul , Jie Peng

Recently researchers working in the LFG framework have proposed algorithms for taking advantage of the implicit context-free components of a unification grammar [Maxwell 96]. This paper clarifies the mathematical foundations of these…

cmp-lg · Computer Science 2008-02-03 Marc Dymetman

Full probability models are critical for the statistical modeling of complex networks, and yet there are few general, flexible and widely applicable generative methods. We propose a new family of probability models motivated by the idea of…

Methodology · Statistics 2018-04-13 Ian E. Fellows

We present a simple yet highly generalizable method for explaining interacting parts within a neural network's reasoning process. First, we design an algorithm based on cross derivatives for computing statistical interaction effects between…

Machine Learning · Computer Science 2021-10-12 Samuel Lerman , Chenliang Xu , Charles Venuto , Henry Kautz

We introduce a statistical regression model to investigate the impact of dyadic relations on complex networks generated from observed repeated interactions. It is based on generalised hypergeometric ensembles (gHypEG), a class of…

Physics and Society · Physics 2020-07-21 Giona Casiraghi

Over the years, reasoning over knowledge graphs (KGs), which aims to infer new conclusions from known facts, has mostly focused on static KGs. The unceasing growth of knowledge in real life raises the necessity to enable the inductive…

Computation and Language · Computer Science 2022-09-15 Yuanning Cui , Yuxin Wang , Zequn Sun , Wenqiang Liu , Yiqiao Jiang , Kexin Han , Wei Hu

Signed graphs are an emergent way of representing data in a variety of contexts where antagonistic interactions exist. These include data from biological, ecological, and social systems. Here we propose the concept of communicability for…

Metric Geometry · Mathematics 2025-03-20 Fernando Diaz-Diaz , Ernesto Estrada

Many complex systems are composed of interacting parts, and the underlying laws are usually simple and universal. While graph neural networks provide a useful relational inductive bias for modeling such systems, generalization to new system…

Machine Learning · Computer Science 2022-11-21 Zhe Li , Andreas S. Tolias , Xaq Pitkow

Albeit the ubiquitous use of Graph Neural Networks (GNNs) in machine learning (ML) prediction tasks involving graph-structured data, their interpretability remains challenging. In explainable artificial intelligence (XAI), the Shapley Value…

The growing importance of textual and relational systems has driven interest in enhancing large language models (LLMs) for graph-structured data, particularly Text-Attributed Graphs (TAGs), where samples are represented by textual…

Machine Learning · Computer Science 2025-01-28 Yuanfu Sun , Zhengnan Ma , Yi Fang , Jing Ma , Qiaoyu Tan

Analyzing relational languages by their logical expressiveness is well understood. Something not well understood or even formalized is the vague concept of relational query patterns. What are query patterns? And how can we reason about…

Databases · Computer Science 2022-03-15 Wolfgang Gatterbauer , Cody Dunne , Mirek Riedewald

Large-scale knowledge graphs provide structured representations of human knowledge. However, as it is impossible to collect all knowledge, knowledge graphs are usually incomplete. Reasoning based on existing facts paves a way to discover…

Artificial Intelligence · Computer Science 2022-07-18 Yuliang Wei , Haotian Li , Guodong Xin , Yao Wang , Bailing Wang

Large-scale "pre-train and prompt learning" paradigms have demonstrated remarkable adaptability, enabling broad applications across diverse domains such as question answering, image recognition, and multimodal retrieval. This approach fully…

Graph Neural Networks (GNNs) address two key challenges in applying deep learning to graph-structured data: they handle varying size input graphs and ensure invariance under graph isomorphism. While GNNs have demonstrated broad…

Artificial Intelligence · Computer Science 2026-02-20 Bernardo Cuenca Grau , Eva Feng , Przemysław Andrzej Wałęga

In a recent paper, Girard proposes to use his recent construction of a geometry of interaction in the hyperfinite factor in an innovative way to characterize complexity classes. We begin by giving a detailed explanation of both the choices…

Logic in Computer Science · Computer Science 2015-01-23 Clément Aubert , Thomas Seiller

Artificial intelligence (AI) has undergone a renaissance recently, making major progress in key domains such as vision, language, control, and decision-making. This has been due, in part, to cheap data and cheap compute resources, which…

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