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Graph clustering is a fundamental computational problem with a number of applications in algorithm design, machine learning, data mining, and analysis of social networks. Over the past decades, researchers have proposed a number of…

Data Structures and Algorithms · Computer Science 2019-04-12 He Sun , Luca Zanetti

Edge bundling techniques cluster edges with similar attributes (i.e. similarity in direction and proximity) together to reduce the visual clutter. All edge bundling techniques to date implicitly or explicitly cluster groups of individual…

Graphics · Computer Science 2021-10-29 Markus Wallinger , Daniel Archambault , David Auber , Martin Nöllenburg , Jaakko Peltonen

We study the algorithmic aspect of edge bundling. A bundled crossing in a drawing of a graph is a group of crossings between two sets of parallel edges. The bundled crossing number is the minimum number of bundled crossings that group all…

Computational Geometry · Computer Science 2016-09-02 Md. Jawaherul Alam , Martin Fink , Sergey Pupyrev

This paper presents a model for a dynamical system where particles dominate edges in a complex network. The proposed dynamical system is then extended to an application on the problem of community detection and data clustering. In the case…

Social and Information Networks · Computer Science 2017-05-17 Paulo Roberto Urio , Zhao Liang

Graphs and networks are used to model interactions in a variety of contexts. There is a growing need to quickly assess the characteristics of a graph in order to understand its underlying structure. Some of the most useful metrics are…

Social and Information Networks · Computer Science 2014-12-02 Tamara G. Kolda , Ali Pinar , Todd Plantenga , C. Seshadhri , Christine Task

Traditionally, graph quality metrics focus on readability, but recent studies show the need for metrics which are more specific to the discovery of patterns in graphs. Cluster analysis is a popular task within graph analysis, yet there is…

Data Structures and Algorithms · Computer Science 2019-08-22 Amyra Meidiana , Seok-Hee Hong , Peter Eades , Daniel Keim

The paper tackles the problem of clustering multiple networks, directed or not, that do not share the same set of vertices, into groups of networks with similar topology. A statistical model-based approach based on a finite mixture of…

Statistics Theory · Mathematics 2023-11-07 Tabea Rebafka

Clustering is a technique for the analysis of datasets obtained by empirical studies in several disciplines with a major application for biomedical research. Essentially, clustering algorithms are executed by machines aiming at finding…

Quantitative Methods · Quantitative Biology 2024-09-30 Diego Ulisse Pizzagalli , Santiago Fernandez Gonzalez , Rolf Krause

Edge bundling is an important concept heavily used for graph visualization purposes. To enable the comparison with other established near-planarity models in graph drawing, we formulate a new edge-bundling model which is inspired by the…

Computational Geometry · Computer Science 2018-09-10 Patrizio Angelini , Michael A. Bekos , Michael Kaufmann , Philipp Kindermann , Thomas Schneck

We recently proposed a new ensemble clustering algorithm for graphs (ECG) based on the concept of consensus clustering. We validated our approach by replicating a study comparing graph clustering algorithms over benchmark graphs, showing…

Machine Learning · Computer Science 2021-02-17 Valérie Poulin , François Théberge

Graphs are used to model interactions in a variety of contexts, and there is a growing need to quickly assess the structure of such graphs. Some of the most useful graph metrics are based on triangles, such as those measuring social…

Social and Information Networks · Computer Science 2014-10-21 C. Seshadhri , Ali Pinar , Tamara G. Kolda

We present a novel hierarchical graph clustering algorithm inspired by modularity-based clustering techniques. The algorithm is agglomerative and based on a simple distance between clusters induced by the probability of sampling node pairs.…

Social and Information Networks · Computer Science 2018-06-25 Thomas Bonald , Bertrand Charpentier , Alexis Galland , Alexandre Hollocou

Current modularity-based community detection algorithms attempt to find cluster memberships that maximize modularity within a fixed graph topology. Diverging from this conventional approach, our work introduces a novel strategy that employs…

Data Analysis, Statistics and Probability · Physics 2024-02-27 Yongyu Wang , Shiqi Hao , Xiaoyang Wang , Xiaotian Zhuang

Higher-order connectivity patterns such as small induced sub-graphs called graphlets (network motifs) are vital to understand the important components (modules/functional units) governing the configuration and behavior of complex networks.…

Social and Information Networks · Computer Science 2020-09-15 Aldo G. Carranza , Ryan A. Rossi , Anup Rao , Eunyee Koh

Graphs may be used to represent many different problem domains -- a concrete example is that of detecting communities in social networks, which are represented as graphs. With big data and more sophisticated applications becoming widespread…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-04-03 Miguel E. Coimbra , Alexandre P. Francisco , Luis Veiga

Large datasets with interactions between objects are common to numerous scientific fields (i.e. social science, internet, biology...). The interactions naturally define a graph and a common way to explore or summarize such dataset is graph…

Applications · Statistics 2009-10-13 Hugo Zanghi , Stevenn Volant , Christophe Ambroise

With the recent popularity of graphical clustering methods, there has been an increased focus on the information between samples. We show how learning cluster structure using edge features naturally and simultaneously determines the most…

Machine Learning · Statistics 2016-05-09 Matt Barnes , Artur Dubrawski

A canonical problem in graph mining is the detection of dense communities. This problem is exacerbated for a graph with a large order and size -- the number of vertices and edges -- as many community detection algorithms scale poorly. In…

Social and Information Networks · Computer Science 2015-02-17 Heng Wang , Da Zheng , Randal Burns , Carey Priebe

Clustering large, mixed data is a central problem in data mining. Many approaches adopt the idea of k-means, and hence are sensitive to initialisation, detect only spherical clusters, and require a priori the unknown number of clusters. We…

Machine Learning · Statistics 2020-11-13 Joshua Tobin , Mimi Zhang

Data clustering with uneven distribution in high level noise is challenging. Currently, HDBSCAN is considered as the SOTA algorithm for this problem. In this paper, we propose a novel clustering algorithm based on what we call graph of…

Machine Learning · Computer Science 2020-09-25 Zhangyang Gao , Haitao Lin , Stan. Z Li