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Graph convolutional networks (GCNs) are widely used in graph-based applications such as graph classification and segmentation. However, current GCNs have limitations on implementation such as network architectures due to their irregular…

Computer Vision and Pattern Recognition · Computer Science 2021-05-25 Yecheng Lyu , Xinming Huang , Ziming Zhang

Knowledge graphs (KGs) enhance the performance of large language models (LLMs) and search engines by providing structured, interconnected data that improves reasoning and context-awareness. However, KGs only focus on text data, thereby…

Computation and Language · Computer Science 2024-08-09 Khai Le-Duc , Quy-Anh Dang , Tan-Hanh Pham , Truong-Son Hy

Understanding the function of individual neurons within language models is essential for mechanistic interpretability research. We propose $\textbf{Neuron to Graph (N2G)}$, a tool which takes a neuron and its dataset examples, and…

Machine Learning · Computer Science 2023-04-26 Alex Foote , Neel Nanda , Esben Kran , Ionnis Konstas , Fazl Barez

This paper introduces SGL, a graphics language that is aesthetically similar to SQL. As a graphical counterpart to SQL, SGL enables specification of statistical graphics within SQL query interfaces. SGL is based on a grammar of graphics…

Programming Languages · Computer Science 2025-12-11 Jon Chapman

The Transformer architecture has become a dominant choice in many domains, such as natural language processing and computer vision. Yet, it has not achieved competitive performance on popular leaderboards of graph-level prediction compared…

Machine Learning · Computer Science 2021-11-25 Chengxuan Ying , Tianle Cai , Shengjie Luo , Shuxin Zheng , Guolin Ke , Di He , Yanming Shen , Tie-Yan Liu

The remarkable success of large language models (LLMs) has motivated researchers to adapt them as universal predictors for various graph tasks. As a widely recognized paradigm, Graph-Tokenizing LLMs (GTokenLLMs) compress complex graph data…

Computation and Language · Computer Science 2026-05-06 Zhongjian Zhang , Yue Yu , Mengmei Zhang , Junping Du , Xiao Wang , Chuan Shi

We introduce pyGSL, a Python library that provides efficient implementations of state-of-the-art graph structure learning models along with diverse datasets to evaluate them on. The implementations are written in GPU-friendly ways, allowing…

Machine Learning · Computer Science 2022-11-08 Max Wasserman , Gonzalo Mateos

Applied research in graph algorithms and combinatorial structures needs comprehensive and versatile software libraries. However, the design and the implementation of flexible libraries are challenging activities. Among the other problems…

Software Engineering · Computer Science 2007-05-23 Maurizio Pizzonia , Giuseppe Di Battista

We present a graph neural network model for solving graph-to-graph learning problems. Most deep learning on graphs considers ``simple'' problems such as graph classification or regressing real-valued graph properties. For such tasks, the…

Machine Learning · Computer Science 2021-06-08 Guan Wang , Francois Bernard Lauze , Aasa Feragen

Graph processing is used extensively in areas from social networking mining to web indexing. We demonstrate that the performance and dependability of such applications critically hinges on the graph data structure used, because a fixed,…

Programming Languages · Computer Science 2014-12-30 Amlan Kusum , Iulian Neamtiu , Rajiv Gupta

Retrosynthesis prediction is one of the fundamental challenges in organic chemistry and related fields. The goal is to find reactants molecules that can synthesize product molecules. To solve this task, we propose a new graph-to-graph…

Quantitative Methods · Quantitative Biology 2022-04-20 Zaiyun Lin , Shiqiu Yin , Lei Shi , Wenbiao Zhou , YingSheng Zhang

Polymorphic types are an important feature in most strongly typed programming languages. They allow functions to be written in a way that can be used with different data types, while still enforcing the relationship and constraints between…

Programming Languages · Computer Science 2024-05-22 Shuai Fu , Tim Dwyer , Peter J. Stuckey

The celebrated Seq2Seq technique and its numerous variants achieve excellent performance on many tasks such as neural machine translation, semantic parsing, and math word problem solving. However, these models either only consider input…

Computation and Language · Computer Science 2020-10-07 Shucheng Li , Lingfei Wu , Shiwei Feng , Fangli Xu , Fengyuan Xu , Sheng Zhong

Many NLP applications can be framed as a graph-to-sequence learning problem. Previous work proposing neural architectures on this setting obtained promising results compared to grammar-based approaches but still rely on linearisation…

Computation and Language · Computer Science 2018-06-27 Daniel Beck , Gholamreza Haffari , Trevor Cohn

We present a theoretically grounded Gaussian process framework that leverages neural feature maps to construct expressive kernels. We show that the learned feature map can be interpreted as an optimal low-rank approximation to a Gram matrix…

Machine Learning · Statistics 2026-05-12 Anthony Stephenson

Generic programming is an effective methodology for developing reusable software libraries. Many programming languages provide generics and have features for describing interfaces, but none completely support the idioms used in generic…

Programming Languages · Computer Science 2007-08-17 Jeremy G. Siek , Andrew Lumsdaine

Explainable artificial intelligence (XAI) is an important area in the AI community, and interpretability is crucial for building robust and trustworthy AI models. While previous work has explored model-level and instance-level explainable…

Machine Learning · Computer Science 2025-12-05 Xudong Wang , Ziheng Sun , Chris Ding , Jicong Fan

Standard transformer-based language models, while powerful for general text, often struggle with the fine-grained syntax and entity relationships in complex technical, engineering documents. To address this, we propose the Contextual Graph…

Computation and Language · Computer Science 2025-08-05 Karan Reddy , Mayukha Pal

We propose an amortized analysis that approximates the resource usage of a Haskell expression. Using the plugin API of GHC, we convert the Haskell code into a simplified representation called GHC Core. We then apply a type-based system…

Programming Languages · Computer Science 2019-08-20 Franz Siglmüller

Graph transformation formalisms have proven to be suitable tools for the modelling of chemical reactions. They are well established in theoretical studies and increasingly also in practical applications in chemistry. The latter is made…

Discrete Mathematics · Computer Science 2022-08-29 Jakob L. Andersen , Rolf Fagerberg , Juri Kolčák , Christophe V. F. P. Laurent , Daniel Merkle , Nikolai Nøjgaard