Related papers: If the Current Clique Algorithms are Optimal, so i…
A fundamental problem in computer science is to find all the common zeroes of $m$ quadratic polynomials in $n$ unknowns over $\mathbb{F}_2$. The cryptanalysis of several modern ciphers reduces to this problem. Up to now, the best complexity…
The MaxClique problem, finding the largest complete subgraph in an Erd{\"o}s-R{\'e}nyi $G(N,p)$ random graph in the large $N$ limit, is a well-known example of a simple problem for which finding any approximate solution within a factor of…
Motivated by a historical combinatorial problem that resembles the well-known Josephus problem, we investigate circular partition algorithms and formulate problems in deterministic finite automata with practical algorithms. The historical…
In this paper we revisit the classical regular expression matching problem, namely, given a regular expression $R$ and a string $Q$, decide if $Q$ matches one of the strings specified by $R$. Let $m$ and $n$ be the length of $R$ and $Q$,…
In recent years several compressed indexes based on variants of the Burrows-Wheeler transformation have been introduced. Some of these index structures far more complex than a single string, as was originally done with the FM-index…
The \Problem{knapsack} problem is a fundamental problem in combinatorial optimization. It has been studied extensively from theoretical as well as practical perspectives as it is one of the most well-known NP-hard problems. The goal is to…
We study the problem of counting the number of {\em isomorphic} copies of a given {\em template} graph, say $H$, in the input {\em base} graph, say $G$. In general, it is believed that polynomial time algorithms that solve this problem…
We give a simple, greedy $O(n^{\omega+0.5})=O(n^{2.872})$-time algorithm to list-decode planted cliques in a semirandom model introduced in [CSV17] (following [FK01]) that succeeds whenever the size of the planted clique is $k\geq…
We investigate computational problems involving large weights through the lens of kernelization, which is a framework of polynomial-time preprocessing aimed at compressing the instance size. Our main focus is the weighted Clique problem,…
In this paper we investigate the problem of partitioning an input string T in such a way that compressing individually its parts via a base-compressor C gets a compressed output that is shorter than applying C over the entire T at once.…
The concept of $k$-defective clique, a relaxation of clique by allowing up-to $k$ missing edges, has been receiving increasing interests recently. Although the problem of finding the maximum $k$-defective clique is NP-hard, several…
Finding dense subgraphs in a graph is a fundamental graph mining task, with applications in several fields. Algorithms for identifying dense subgraphs are used in biology, in finance, in spam detection, etc. Standard formulations of this…
The maximal clique enumeration (MCE) problem has numerous applications in biology, chemistry, sociology, and graph modeling. Though this problem is well studied, most current research focuses on finding solutions in large sparse graphs or…
I present a single algorithm which solves the clique problems, "What is the largest size clique?", "What are all the maximal cliques?" and the decision problem, "Does a clique of size k exist?" for any given graph in polynomial time. The…
In this paper, we prove that assuming the exponential time hypothesis (ETH), there is no $f(k)\cdot n^{k^{o(1/\log\log k)}}$-time algorithm that can decide whether an $n$-vertex graph contains a clique of size $k$ or contains no clique of…
Given a simple graph $G$ and an integer $k$, the goal of $k$-Clique problem is to decide if $G$ contains a complete subgraph of size $k$. We say an algorithm approximates $k$-Clique within a factor $g(k)$ if it can find a clique of size at…
Parameterized complexity enables the practical solution of generally intractable NP-hard problems when certain parameters are small, making it particularly useful in real-world applications. The study of string problems in this framework…
A Wheeler automaton is a finite state automaton whose states admit a total Wheeler order, reflecting the co-lexicographic order of the strings labeling source-to-node paths. A Wheeler language is a regular language admitting an accepting…
Let G be a context-free grammar (CFG) in Chomsky normal form. We take the number of rules in G to be the size of G. We also assume all CFGs are in Chomsky normal form. We consider the question of, given a string w of length n, what is the…
A classic data structure problem is to preprocess a string T of length $n$ so that, given a query $q$, we can quickly find all substrings of T with Hamming distance at most $k$ from the query string. Variants of this problem have seen…