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We describe the current state and future plans for a set of tools for scientific data management (SDM) designed to support scientific transparency and reproducible research. SDM has been in active use at our MRI Center for more than two…

Quantitative Methods · Quantitative Biology 2015-02-25 B. A. Wandell , A. Rokem , L. M. Perry , G. Schaefer , R. F. Dougherty

Generative AI is reshaping how computing systems are designed, optimized, and built, yet research remains fragmented across software, architecture, and chip design communities. This paper takes a cross-stack perspective, examining how…

Over the past two decades the field of computational science and engineering (CSE) has penetrated both basic and applied research in academia, industry, and laboratories to advance discovery, optimize systems, support decision-makers, and…

While large language models (LLMs) have transformed AI agents into proficient executors of computational materials science, performing a hundred simulations does not make a researcher. What distinguishes research from routine execution is…

Computational Physics · Physics 2026-03-16 Haonan Huang

Computerization of research activities led to the creation of large specialized information resources, platforms, services and software to support scientific research. However, their shortcomings do not allow to fully realizing the…

Digital Libraries · Computer Science 2015-04-21 Dmitry Prokudin

Computer systems have evolved over the years starting from sizable, single-user, slow, and expensive machines to multi-user, fast, cheaper, and small-sized machines. The use of multi-user computer networks has given rise to a new paradigm…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-02-09 Aneesh Khole , Atharva Thakar , Avadhoot Kulkarni , Hrithik Jadhav , Shreyas Shende , Varad Karajkhede

Engineering and materials software is increasingly difficult to track in the scholarly and technical literature because publication volume is growing rapidly and software citation practices remain inconsistent. This is particularly true for…

Digital Libraries · Computer Science 2026-02-23 David Mercier

Modern scientific discovery increasingly requires coordinating distributed facilities and heterogeneous resources, forcing researchers to act as manual workflow coordinators rather than scientists. Advances in AI leading to AI agents show…

Artificial Intelligence · Computer Science 2025-09-15 Woong Shin , Renan Souza , Daniel Rosendo , Frédéric Suter , Feiyi Wang , Prasanna Balaprakash , Rafael Ferreira da Silva

The essence of distributed computing systems is how to schedule incoming requests and how to allocate all computing nodes to minimize both time and computation costs. In this paper, we propose a cost-aware optimal scheduling and allocation…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-12-02 Wei Ren , Eleftherios Vlahakis , Nikolaos Athanasopoulos , Raphael Jungers

We make a case for "planetary computing" -- infrastructure to handle the ingestion, transformation, analysis and publication of global data products for furthering environmental science and enabling better informed policy-making. We draw on…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-06-04 Patrick Ferris , Michael Dales , Sadiq Jaffer , Amelia Holcomb , Eleanor Toye Scott , Thomas Swinfield , Alison Eyres , Andrew Balmford , David Coomes , Srinivasan Keshav , Anil Madhavapeddy

The Production and Distributed Analysis (PanDA) system, originally developed for the ATLAS experiment at the CERN Large Hadron Collider (LHC), has evolved into a robust platform for orchestrating large-scale workflows across distributed…

Scientific processes rely on software as an important tool for data acquisition, analysis, and discovery. Over the years sustainable software development practices have made progress in being considered as an integral component of research.…

Software Engineering · Computer Science 2023-12-21 Akash Dhruv , Anshu Dubey

Data-driven computational approaches have evolved to enable extraction of information from medical images with a reliability, accuracy and speed which is already transforming their interpretation and exploitation in clinical practice. While…

Image and Video Processing · Electrical Eng. & Systems 2019-10-22 Tom Vercauteren , Mathias Unberath , Nicolas Padoy , Nassir Navab

With the release of Generative AI systems such as ChatGPT, an increasing interest in using Artificial Intelligence (AI) has been observed across domains, including higher education. While emerging statistics show the popularity of using AI…

Computers and Society · Computer Science 2024-03-26 Bart Rienties , John Domingue , Subby Duttaroy , Christothea Herodotou , Felipe Tessarolo , Denise Whitelock

Industrial cyber physical systems operate under heterogeneous sensing, stochastic dynamics, and shifting process conditions, producing data that are often incomplete, unlabeled, imbalanced, and domain shifted. High-fidelity datasets remain…

Computational Engineering, Finance, and Science · Computer Science 2025-12-11 Qianyu Zhou

Data-driven research is increasingly ubiquitous and data itself is a defining asset for researchers, particularly in the computational social sciences and humanities. Entire careers and research communities are built around valuable,…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-10-12 Yadu N. Babuji , Kyle Chard , Aaron Gerow , Eamon Duede

An increasing amount of data is being injected into the network from IoT (Internet of Things) applications. Many of these applications, developed to improve society's quality of life, are latency-critical and inject large amounts of data…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-05-13 Patricia Arroba , Rajkumar Buyya , Román Cárdenas , José L. Risco-Martín , José M. Moya

As research and practice in artificial intelligence (A.I.) grow in leaps and bounds, the resources necessary to sustain and support their operations also grow at an increasing pace. While innovations and applications from A.I. have brought…

Artificial Intelligence · Computer Science 2023-01-30 Dan Zhao , Nathan C. Frey , Joseph McDonald , Matthew Hubbell , David Bestor , Michael Jones , Andrew Prout , Vijay Gadepally , Siddharth Samsi

The Computing Continuum (CC) is an emerging Internet-based computing paradigm that spans from local Internet of Things sensors and constrained edge devices to large-scale cloud data centers. Its goal is to orchestrate a vast array of…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-06-02 Victor Casamayor Pujol , Boris Sedlak , Tommaso Salvatori , Karl Friston , Schahram Dustdar
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