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Modeling of relation pattern is the core focus of previous Knowledge Graph Embedding works, which represents how one entity is related to another semantically by some explicit relation. However, there is a more natural and intuitive…

Computation and Language · Computer Science 2021-10-05 Ren Li , Yanan Cao , Qiannan Zhu , Xiaoxue Li , Fang Fang

Knowledge graph reasoning (KGR), aiming to deduce new facts from existing facts based on mined logic rules underlying knowledge graphs (KGs), has become a fast-growing research direction. It has been proven to significantly benefit the…

Artificial Intelligence · Computer Science 2024-10-28 Ke Liang , Lingyuan Meng , Meng Liu , Yue Liu , Wenxuan Tu , Siwei Wang , Sihang Zhou , Xinwang Liu , Fuchun Sun

This paper introduces epistemic graphs as a generalization of the epistemic approach to probabilistic argumentation. In these graphs, an argument can be believed or disbelieved up to a given degree, thus providing a more fine--grained…

Artificial Intelligence · Computer Science 2020-01-15 Anthony Hunter , Sylwia Polberg , Matthias Thimm

In most current applications of belief networks, domain knowledge is represented by a single belief network that applies to all problem instances in the domain. In more complex domains, problem-specific models must be constructed from a…

Artificial Intelligence · Computer Science 2013-02-08 Kathryn Blackmond Laskey , Suzanne M. Mahoney

Knowledge graphs (KGs) have become valuable knowledge resources in various applications, and knowledge graph embedding (KGE) methods have garnered increasing attention in recent years. However, conventional KGE methods still face challenges…

Computation and Language · Computer Science 2023-12-19 Mingyang Chen , Wen Zhang , Yuxia Geng , Zezhong Xu , Jeff Z. Pan , Huajun Chen

Knowledge graphs, collectively as a knowledge network, have become critical tools for knowledge discovery in computable and explainable knowledge systems. Due to the semantic and structural complexities of biomedical data, these knowledge…

Other Quantitative Biology · Quantitative Biology 2025-09-29 Chunlei Wu , Hongfang Liu , Jason Flannick , Mark A. Musen , Andrew I. Su , Lawrence Hunter , Thomas M. Powers , Cathy H. Wu

A large-scale knowledge graph enhances reproducibility in biomedical data discovery by providing a standardized, integrated framework that ensures consistent interpretation across diverse datasets. It improves generalizability by connecting…

Methodology · Statistics 2024-10-11 Suqi Liu , Tianxi Cai , Xiaoou Li

Low-dimensional embeddings of knowledge graphs and behavior graphs have proved remarkably powerful in varieties of tasks, from predicting unobserved edges between entities to content recommendation. The two types of graphs can contain…

Machine Learning · Computer Science 2019-08-29 Yuting Ye , Xuwu Wang , Jiangchao Yao , Kunyang Jia , Jingren Zhou , Yanghua Xiao , Hongxia Yang

Knowledge-grounded dialogue is a task of generating an informative response based on both the dialogue history and external knowledge source. In general, there are two forms of knowledge: manually annotated knowledge graphs and knowledge…

Computation and Language · Computer Science 2023-12-14 Yizhe Yang , Heyan Huang , Yihang Liu , Yang Gao

Knowledge graph embeddings rank among the most successful methods for link prediction in knowledge graphs, i.e., the task of completing an incomplete collection of relational facts. A downside of these models is their strong sensitivity to…

Machine Learning · Statistics 2019-07-03 Robert Bamler , Farnood Salehi , Stephan Mandt

Knowledge graphs and ontologies are becoming increasingly important in the context of making data and metadata findable, accessible, interoperable, and reusable (FAIR). We introduce the concept of Semantic Units for organizing Knowledge…

Databases · Computer Science 2023-11-09 Lars Vogt

Knowledge Graphs (KG) constitute a flexible representation of complex relationships between entities particularly useful for biomedical data. These KG, however, are very sparse with many missing edges (facts) and the visualisation of the…

Artificial Intelligence · Computer Science 2016-12-08 Armando Vieira

A graph theoretic perspective is taken for a range of phenomena in continuum physics in order to develop representations for analysis of large scale, high-fidelity solutions to these problems. Of interest are phenomena described by partial…

Computational Physics · Physics 2019-05-22 R. Banerjee , K. Sagiyama , G. H. Teichert , K. Garikipati

Motivation: Biological data and knowledge bases increasingly rely on Semantic Web technologies and the use of knowledge graphs for data integration, retrieval and federated queries. In the past years, feature learning methods that are…

Quantitative Methods · Quantitative Biology 2017-05-01 Mona Alshahrani , Mohammed Asif Khan , Omar Maddouri , Akira R Kinjo , Núria Queralt-Rosinach , Robert Hoehndorf

Knowledge graphs store large numbers of relations efficiently, but they remain weak at representing a quieter difficulty: the meaning of a concept often shifts with the domain in which it is used. A triple such as Apple, instance-of,…

Artificial Intelligence · Computer Science 2026-04-07 Chao Li , Yuru Wang , Chunyi Zhao

Network theory has proven to be a powerful tool in describing and analyzing systems by modelling the relations between their constituent objects. In recent years great progress has been made by augmenting `traditional' network theory.…

Data Analysis, Statistics and Probability · Physics 2016-06-03 Dominik Traxl , Niklas Boers , Jürgen Kurths

To solve the information explosion problem and enhance user experience in various online applications, recommender systems have been developed to model users preferences. Although numerous efforts have been made toward more personalized…

Information Retrieval · Computer Science 2020-03-03 Qingyu Guo , Fuzhen Zhuang , Chuan Qin , Hengshu Zhu , Xing Xie , Hui Xiong , Qing He

This paper proposes a categorical framework for knowledge graphs linking combinatorial graph structure with topos-theoretic semantics. Knowledge graphs are represented as labelled directed multigraphs and analysed through incidence matrices…

Social and Information Networks · Computer Science 2026-03-09 Moses Boudourides

Neural models of Knowledge Base data have typically employed compositional representations of graph objects: entity and relation embeddings are systematically combined to evaluate the truth of a candidate Knowedge Base entry. Using a model…

Computation and Language · Computer Science 2019-08-14 Matthias Lalisse , Paul Smolensky

Knowledge graphs (KGs) have become the standard technology for the representation of factual information in applications such as recommendation engines, search, and question-answering systems. However, the continual updating of KGs, as well…

Artificial Intelligence · Computer Science 2023-07-24 Walid S. Saba