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Related papers: Optimal chemotaxis in animal cell intermittent mig…

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This paper is concerned with a non-homogeneous in space and non-local in time random walk model for anomalous subdiffusive transport of cells. Starting with a Markov model involving a structured probability density function, we derive the…

Statistical Mechanics · Physics 2013-02-21 S. Fedotov , A. O. Ivanov , A. Y. Zubarev

There are various cases of animal movement where behaviour broadly switches between two modes of operation, corresponding to a long distance movement state and a resting or local movement state. Here a mathematical description of this…

Quantitative Methods · Quantitative Biology 2014-08-01 Jake P. Taylor-King , Emiel van Loon , Gabriel Rosser , S. Jon Chapman

Experiments of cell migration and chemotaxis assays have been classically performed in the so-called Boyden Chambers. A recent technology, xCELLigence Real Time Cell Analysis, is now allowing to monitor the cell migration in real time. This…

Motile biological cells in tissue often display the phenomenon of durotaxis, i.e. they tend to move towards stiffer parts of substrate tissue. The mechanism for this behavior is not completely understood. We consider simplified models for…

Biological Physics · Physics 2019-01-03 Charles R. Doering , Xiaoming Mao , Leonard M. Sander

In empirical studies of random walks, continuous trajectories of animals or individuals are usually sampled over a finite number of points in space and time. It is however unclear how this partial observation affects the measured…

Physics and Society · Physics 2018-03-13 Riccardo Gallotti , Rémi Louf , Jean-Marc Luck , Marc Barthelemy

We study chemotaxis in a porous medium using as a model a biased ("hungry") random walk on a percolating cluster. In close resemblance to the 1980s arcade game Pac-Man, the hungry random walker consumes food, which is initially distributed…

Statistical Mechanics · Physics 2016-07-26 Tanja Schilling , Thomas Voigtmann

Background: This study is mainly motivated by the need of understanding how the diffusion behaviour of a biomolecule (or even of a larger object) is affected by other moving macromolecules, organelles, and so on, inside a living cell,…

Biological Physics · Physics 2016-01-15 Matteo Gori , Irene Donato , Elena Floriani , Ilaria Nardecchia , Marco Pettini

Empirical observations indicate striking similarities among locomotion in terrestrial animals, birds, and fish, but unifying physical grounds are lacking. When applied to efficient locomotion, the analytical mechanics principle of minimum…

Biological Physics · Physics 2015-05-14 Valery B. Kokshenev

Legged robots are able to navigate complex terrains by continuously interacting with the environment through careful selection of contact sequences and timings. However, the combinatorial nature behind contact planning hinders the…

1. Spatial memory plays a role in the way animals perceive their environments, resulting in memory-informed movement patterns that are observable to ecologists. Developing mathematical techniques to understand how animals use memory in…

Quantitative Methods · Quantitative Biology 2022-02-17 Peter R. Thompson , Andrew E. Derocher , Mark A. Edwards , Mark A. Lewis

Stereotyped behaviors are series of postures that show very little variability between repeats. They have been used to classify the dynamics of individuals, groups and species without reference to the lower-level mechanisms that drive them.…

Cell Behavior · Quantitative Biology 2019-06-12 Luke Tweedy , Patrick Witzel , Doris Heinrich , Robert H. Insall , Robert G. Endres

Finding the best strategy to minimize the time needed to find a given target is a crucial task both in nature and in reaching decisive technological advances. By considering learning agents able to switch their dynamics between standard and…

Position recordings of the two-dimensional tracks of animals moving over landscapes has progressed over the past three decades from hourly to second-by-second locations. Track segmentation methods for analyzing the behavioral information in…

Populations and Evolution · Quantitative Biology 2024-06-03 Wayne M Getz

A quantum walk on a lattice is a paradigm of a quantum search in a database. The database qubit strings are the lattice sites, qubit rotations are tunneling events, and the target site is tagged by an energy shift. For quantum walks on a…

Quantum Physics · Physics 2025-10-14 Emma C. King , Moritz Linnebacher , Peter P. Orth , Matteo Rizzi , Giovanna Morigi

Cells rely on the ability to sense and respond to small spatial differences in chemoattractant concentrations for survival. There is growing evidence that this is accomplished by setting the signaling system near the threshold for…

Cell Behavior · Quantitative Biology 2022-05-19 Debojyoti Biswas , Parijat Banerjee , Pablo A. Iglesias

Chemotaxis can be defined as an innate behavioural response by an organism to a directional stimulus, in which bacteria, and other single-cell or multicellular organisms direct their movements according to certain chemicals in their…

Multiagent Systems · Computer Science 2016-11-18 Vitorino Ramos , C. M. Fernandes , A. C. Rosa , A. Abraham

Living microorganisms are capable of a tactic response to external stimuli by swimming towards or away from the stimulus source; they do so by adapting their tactic signal transduction pathways to the environment. Their self-motility thus…

Soft Condensed Matter · Physics 2016-10-12 Alexander Geiseler , Peter Hänggi , Fabio Marchesoni , Colm Mulhern , Sergey Savel'ev

Bacterial chemotaxis is one of the most extensively studied adaptive responses in cells. Many bacteria are able to bias their apparently random motion to produce a drift in the direction of the increasing chemoattractant concentration. It…

Soft Condensed Matter · Physics 2018-02-07 E. V. Pankratova , A. I. Kalyakulina , M. I. Krivonosov , S. Denisov , K. M. Taute , V. Yu. Zaburdaev

Autologous chemotaxis is the process in which cells secrete and detect molecules to determine the direction of fluid flow. Experiments and theory suggest that autologous chemotaxis fails at high cell densities because molecules from other…

Biological Physics · Physics 2023-05-08 Louis González , Andrew Mugler

Swarming of animal groups enthralls scientists in fields ranging from biology to physics to engineering. Complex swarming patterns often arise from simple interactions between individuals to the benefit of the collective whole. The…

Biological Physics · Physics 2017-09-08 Glenn Palmer , Sho Yaida
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