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This is a vignette for the R package eggCounts version 2.0. The package implements a suite of Bayesian hierarchical models dealing with faecal egg count reductions. The models are designed for a variety of practical situations, including…

Computation · Statistics 2022-02-07 Craig Wang , Reinhard Furrer

We would like to congratulate the authors of "A Bayesian Conjugate Gradient Method" on their insightful paper, and welcome this publication which we firmly believe will become a fundamental contribution to the growing field of probabilistic…

Computation · Statistics 2019-08-09 Francois-Xavier Briol , Francisco A. Diaz De la O , Peter O. Hristov

Bayesian optimization is an approach to optimizing objective functions that take a long time (minutes or hours) to evaluate. It is best-suited for optimization over continuous domains of less than 20 dimensions, and tolerates stochastic…

Machine Learning · Statistics 2018-07-10 Peter I. Frazier

We explore the notion of uncertainty in the context of modern abstractive summarization models, using the tools of Bayesian Deep Learning. Our approach approximates Bayesian inference by first extending state-of-the-art summarization models…

Computation and Language · Computer Science 2022-05-04 Alexios Gidiotis , Grigorios Tsoumakas

In this series of seven papers, predominantly by means of elementary analysis, we establish a number of identities related to the Riemann zeta function. Whilst this paper is mainly expository, some of the formulae reported in it are…

History and Overview · Mathematics 2008-02-17 Donal F. Connon

I developed the lecture notes based on my ``Linear Model'' course at the University of California, Berkeley over the past ten years. This book provides an intermediate-level introduction to the linear model. It balances rigorous proofs and…

Methodology · Statistics 2025-06-23 Peng Ding

Bayesian network is a complete model for the variables and their relationships, it can be used to answer probabilistic queries about them. A Bayesian network can thus be considered a mechanism for automatically applying Bayes' theorem to…

Artificial Intelligence · Computer Science 2010-11-08 Jianguo Ding

The rstap package implements Bayesian spatial temporal aggregated predictor models in R using the probabilistic programming language Stan. A variety of distributions and link functions are supported, allowing users to fit this extension to…

Methodology · Statistics 2018-12-27 Adam Peterson , Brisa Sanchez

Kernel mean embeddings -- integrals of a kernel with respect to a probability distribution -- are essential in Bayesian quadrature, but also widely used in other computational tools for numerical integration or for statistical inference…

Machine Learning · Statistics 2025-04-29 François-Xavier Briol , Alexandra Gessner , Toni Karvonen , Maren Mahsereci

The emergent field of probabilistic numerics has thus far lacked clear statistical principals. This paper establishes Bayesian probabilistic numerical methods as those which can be cast as solutions to certain inverse problems within the…

Methodology · Statistics 2019-11-15 Jon Cockayne , Chris Oates , Tim Sullivan , Mark Girolami

Traditionally, the MaxEnt workshops start by a tutorial day. This paper summarizes my talk during 2001'th workshop at John Hopkins University. The main idea in this talk is to show how the Bayesian inference can naturally give us all the…

Data Analysis, Statistics and Probability · Physics 2009-11-07 Ali Mohammad-Djafari

This document provides and in-depth introduction to the mlr framework for machine learning experiments in R.

Deep neural networks have achieved impressive results on a wide variety of tasks. However, quantifying uncertainty in the network's output is a challenging task. Bayesian models offer a mathematical framework to reason about model…

Machine Learning · Computer Science 2019-05-28 Manikanta Srikar Yellapragada , Chandra Prakash Konkimalla

This paper proposes an algorithm for computing regularized solutions to linear rational expectations models. The algorithm allows for regularization cross-sectionally as well as across frequencies. A variety of numerical examples illustrate…

Econometrics · Economics 2020-10-28 Majid M. Al-Sadoon

Bayesian optimization has become widely popular across various experimental sciences due to its favorable attributes: it can handle noisy data, perform well with relatively small datasets, and provide adaptive suggestions for sequential…

Other Quantitative Biology · Quantitative Biology 2025-08-15 Maximilian Siska , Emma Pajak , Katrin Rosenthal , Antonio del Rio Chanona , Eric von Lieres , Laura Marie Helleckes

In 2014, Chen and Singer solved the summability problem of bivariate rational functions. Later an algorithmic proof was presented by Hou and the author. In this paper, the algorithm will be simplified and adapted to the $q$-case.

Combinatorics · Mathematics 2019-11-13 Rong-Hua Wang

With the arrival of the R packages nlme and lme4, linear mixed models (LMMs) have come to be widely used in experimentally-driven areas like psychology, linguistics, and cognitive science. This tutorial provides a practical introduction to…

Methodology · Statistics 2020-01-17 Tanner Sorensen , Shravan Vasishth

The multivariate Bayesian structural time series (MBSTS) model is a general machine learning model that deals with inference and prediction for multiple correlated time series, where one also has the choice of using a different candidate…

Methodology · Statistics 2023-02-07 Ning Ning , Jinwen Qiu

This paper explores the versatility and depth of Bayesian modeling by presenting a comprehensive range of applications and methods, combining Markov chain Monte Carlo (MCMC) techniques and variational approximations. Covering topics such as…

Applications · Statistics 2025-02-18 Yifei Yan , Juan Sosa , Carlos A. Martínez

This paper offers a comprehensive introduction to Bayesian inference, combining historical context, theoretical foundations, and core analytical examples. Beginning with Bayes' theorem and the philosophical distinctions between Bayesian and…

Methodology · Statistics 2025-12-08 Juan Sosa , Carlos A. Martínez , Danna Cruz
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