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We redevelop persistent homology (topological persistence) from a categorical point of view. The main objects of study are diagrams, indexed by the poset of real numbers, in some target category. The set of such diagrams has an interleaving…

Algebraic Topology · Mathematics 2014-05-13 Peter Bubenik , Jonathan A. Scott

A resolving set of a graph is a set of vertices with the property that the list of distances from any vertex to those in the set uniquely identifies that vertex. In this paper, we construct a resolving set of Johnson graphs, doubled Odd…

Combinatorics · Mathematics 2011-05-11 Jun Guo , Kaishun Wang , Fenggao Li

Distance measures between graphs are important primitives for a variety of learning tasks. In this work, we describe an unsupervised, optimal transport based approach to define a distance between graphs. Our idea is to derive…

Computational Engineering, Finance, and Science · Computer Science 2024-04-11 Michael Scholkemper , Damin Kühn , Gerion Nabbefeld , Simon Musall , Björn Kampa , Michael T. Schaub

Learning node representations is a fundamental problem in graph machine learning. While existing embedding methods effectively preserve local similarity measures, they often fail to capture global functions like graph distances. Inspired by…

Machine Learning · Statistics 2025-10-20 My Le , Luana Ruiz , Souvik Dhara

Mapper graphs are widely used tools in topological data analysis and visualization. They can be understood as discrete approximations of Reeb graphs, providing insight into the shape and connectivity of complex data. Given a…

Computational Geometry · Computer Science 2026-04-17 Erin Wolf Chambers , Ishika Ghosh , Elizabeth Munch , Sarah Percival , Bei Wang

Since persistence diagrams do not admit an inner product structure, a map into a Hilbert space is needed in order to use kernel methods. It is natural to ask if such maps necessarily distort the metric on persistence diagrams. We show that…

Machine Learning · Computer Science 2020-07-31 Peter Bubenik , Alexander Wagner

A set $X$ in the Euclidean space $\mathbb{R}^d$ is called an $m$-distance set if the set of Euclidean distances between two distinct points in $X$ has size $m$. An $m$-distance set $X$ in $\mathbb{R}^d$ is said to be maximal if there does…

Combinatorics · Mathematics 2016-09-22 Saori Adachi , Rina Hayashi , Hiroshi Nozaki , Chika Yamamoto

Given $p$ node pairs in an $n$-node graph, a distance preserver is a sparse subgraph that agrees with the original graph on all of the given pairwise distances. We prove the following bounds on the number of edges needed for a distance…

Data Structures and Algorithms · Computer Science 2021-01-01 Greg Bodwin

Let a \neq b be two positive scalars. A Euclidean representation of a simple graph G in R^r is a mapping of the nodes of G into points in R^r such that the squared Euclidean distance between any two points is a if the corresponding nodes…

Metric Geometry · Mathematics 2018-08-20 A. Y. Alfakih

Many real-world networks of interest are embedded in physical space. We present a new random graph model aiming to reflect the interplay between the geometries of the graph and of the underlying space. The model favors configurations with…

Probability · Mathematics 2017-06-14 Jean-Christophe Mourrat , Daniel Valesin

The subdivision graph $S(\Sigma)$ of a connected graph $\Sigma$ is constructed by adding a vertex in the middle of each edge. In a previous paper written with Cheryl E. Praeger, we characterised the graphs $\Sigma$ such that $S(\Sigma)$ is…

Combinatorics · Mathematics 2011-03-31 Ashraf Daneshkhah , Alice Devillers

Steinerberger proposed a notion of curvature on graphs involving the graph distance matrix (J. Graph Theory, 2023). We show that nonnegative curvature is almost preserved under three graph operations. We characterize the distance matrix and…

Combinatorics · Mathematics 2025-05-06 Wei-Chia Chen , Mao-Pei Tsui

We study two popular ways to sketch the shortest path distances of an input graph. The first is distance preservers, which are sparse subgraphs that agree with the distances of the original graph on a given set of demand pairs. Prior work…

Data Structures and Algorithms · Computer Science 2021-08-17 Greg Bodwin , Virginia Vassilevska Williams

We look at the question of which distance-regular graphs are core-complete, meaning they are isomorphic to their own core or have a complete core. We build on Roberson's homomorphism matrix approach by which method he proved the…

Combinatorics · Mathematics 2025-04-04 Annemarie Geertsema , Chris Godsil , Krystal Guo

Persistence diagrams (PDs), often characterized as sets of death and birth of homology class, have been known for providing a topological representation of a graph structure, which is often useful in machine learning tasks. Prior works rely…

Machine Learning · Computer Science 2022-09-29 Chau Pham , Trung Dang , Peter Chin

Weakly distance-regular digraphs are a natural directed version of distance-regular graphs. In [8], the third author and Suzuki proposed a question when an orientation of a distance-regular graph defines a weakly distance-regular digraph.…

Combinatorics · Mathematics 2024-04-11 Yuefeng Yang , Qing Zeng , Kaishun Wang

One of the central results in the representation theory of distance-regular graphs classifies distance-regular graphs with $\mu\geq 2$ and second largest eigenvalue $\theta_1= b_1-1$. In this paper we give a classification under the…

Combinatorics · Mathematics 2021-07-28 Bohdan Kivva

The size sz(G) of an l_1-graph G=(V,E) is the minimum of n_f/t_f over all its possible l_1-embeddings f into n_f-dimensional hypercube with scale t_f. In terms of v=|V|, the sum of distances between all the pairs of vertices of G is at most…

Combinatorics · Mathematics 2007-05-23 Michel Deza , Dmitrii V. Pasechnik

Johnson and Lindenstrauss (Contemporary Mathematics, 1984) showed that for $n > m$, a scaled random projection $\mathbf{A}$ from $\mathbb{R}^n$ to $\mathbb{R}^m$ is an approximate isometry on any set $S$ of size at most exponential in $m$.…

Computation · Statistics 2025-04-15 Andrej Bogdanov , Alon Rosen , Neekon Vafa , Vinod Vaikuntanathan

Given a metric pair $(X,A)$, i.e. a metric space $X$ and a distinguished closed set $A \subset X$, one may construct in a functorial way a pointed pseudometric space $\mathcal{D}_\infty(X,A)$ of persistence diagrams equipped with the…

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