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Brain tumor segmentation requires accurate identification of hierarchical regions including whole tumor (WT), tumor core (TC), and enhancing tumor (ET) from multi-sequence magnetic resonance imaging (MRI) images. Due to tumor tissue…

Computer Vision and Pattern Recognition · Computer Science 2025-09-23 Mingda Zhang , Yuyang Zheng , Ruixiang Tang , Jingru Qiu , Haiyan Ding

Being able to adequately process and combine data arising from different sites is crucial in neuroimaging, but is difficult, owing to site, sequence and acquisition-parameter dependent biases. It is important therefore to design algorithms…

Image and Video Processing · Electrical Eng. & Systems 2021-11-05 Pedro Borges , Richard Shaw , Thomas Varsavsky , Kerstin Klaser , David Thomas , Ivana Drobnjak , Sebastien Ourselin , M Jorge Cardoso

Limited-angle computed tomography (CT) is often used in clinical applications such as C-arm CT for interventional imaging. However, CT images from limited angles suffers from heavy artifacts due to incomplete projection data. Existing…

Computer Vision and Pattern Recognition · Computer Science 2017-08-01 Jawook Gu , Jong Chul Ye

Convolutional Neural Networks (CNN) have been successful in processing data signals that are uniformly sampled in the spatial domain (e.g., images). However, most data signals do not natively exist on a grid, and in the process of being…

Computer Vision and Pattern Recognition · Computer Science 2019-01-09 Chiyu "Max" Jiang , Dequan Wang , Jingwei Huang , Philip Marcus , Matthias Nießner

A connectional brain template (CBT) is a holistic representation of a population of multi-view brain connectivity graphs, encoding shared patterns and normalizing typical variations across individuals. The federation of CBT learning allows…

Computer Vision and Pattern Recognition · Computer Science 2024-03-15 Geng Chen , Qingyue Wang , Islem Rekik

Photoacoustic imaging combines the high contrast of optical imaging with the deep penetration depth of ultrasonic imaging, showing great potential in cerebrovascular disease detection. However, the ultrasonic wave suffers strong attenuation…

Medical Physics · Physics 2025-09-08 Pengcheng Wan , Fan Zhang , Yuting Shen , Hulin Zhao , Xiran Cai , Xiaohua Feng , Fei Gao

Understanding how the brain represents visual information is a fundamental challenge in neuroscience and artificial intelligence. While AI-driven decoding of neural data has provided insights into the human visual system, integrating…

Neural and Evolutionary Computing · Computer Science 2025-10-07 Dongyang Li , Haoyang Qin , Mingyang Wu , Chen Wei , Quanying Liu

Decoding visual images from brain activity has significant potential for advancing brain-computer interaction and enhancing the understanding of human perception. Recent approaches align the representation spaces of images and brain…

Computer Vision and Pattern Recognition · Computer Science 2025-06-11 Nona Rajabi , Antônio H. Ribeiro , Miguel Vasco , Farzaneh Taleb , Mårten Björkman , Danica Kragic

Despite the large amount of brain CT data generated in clinical practice, the availability of CT datasets for deep learning (DL) research is currently limited. Furthermore, the data can be insufficiently or improperly prepared for machine…

Image and Video Processing · Electrical Eng. & Systems 2023-09-27 Alessandro Fontanella , Wenwen Li , Grant Mair , Antreas Antoniou , Eleanor Platt , Chloe Martin , Paul Armitage , Emanuele Trucco , Joanna Wardlaw , Amos Storkey

The popularity and diffusion of wearable devices provides new opportunities for sensor-based human activity recognition that leverages deep learning-based algorithms. Although impressive advances have been made, two major challenges remain.…

Signal Processing · Electrical Eng. & Systems 2024-02-16 Mengna Liu , Dong Xiang , Xu Cheng , Xiufeng Liu , Dalin Zhang , Shengyong Chen , Christian S. Jensen

We introduce a method that takes advantage of high-quality pretrained multimodal representations to explore fine-grained semantic networks in the human brain. Previous studies have documented evidence of functional localization in the…

Artificial Intelligence · Computer Science 2023-06-07 Cory Efird , Alex Murphy , Joel Zylberberg , Alona Fyshe

Head Non-contrast computed tomography (NCCT) scan remain the preferred primary imaging modality due to their widespread availability and speed. However, the current standard for manual annotations of abnormal brain tissue on head NCCT scans…

Image and Video Processing · Electrical Eng. & Systems 2023-07-11 Arunkumar Govindarajan , Arjun Agarwal , Subhankar Chattoraj , Dennis Robert , Satish Golla , Ujjwal Upadhyay , Swetha Tanamala , Aarthi Govindarajan

Brain network analysis is a useful approach to studying human brain disorders because it can distinguish patients from healthy people by detecting abnormal connections. Due to the complementary information from multiple modal neuroimages,…

Image and Video Processing · Electrical Eng. & Systems 2023-08-22 Qiankun Zuo , Yanfei Zhu , Libin Lu , Zhi Yang , Yuhui Li , Ning Zhang

This paper presents and validates CTseg, a freely available software for brain CT segmentation, spatial normalisation, and volumetrics. CTseg builds on the Multi-Brain generative modelling framework, providing a CT-specific pipeline that…

Image and Video Processing · Electrical Eng. & Systems 2026-05-29 Mikael Brudfors

Different CT segmentation datasets are typically obtained from different scanners under different capture settings and often provide segmentation labels for a limited and often disjoint set of organs. Using these heterogeneous data…

Image and Video Processing · Electrical Eng. & Systems 2025-08-14 Asim Ukaye , Numan Saeed , Karthik Nandakumar

In MRI, variations in scan parameters, sequence, or hardware can lead to discrepancies in image appearance, even for the same subject. These inconsistencies, known as domain shifts, can hinder image analysis and degrade the performance of…

Image and Video Processing · Electrical Eng. & Systems 2026-05-05 Minjun Kim , Dong Ju Mun , Hwihun Jeong , Hangyeol Park , Haechang Lee , Se Young Chun , Jongho Lee

Large-scale brain imaging datasets provide unprecedented opportunities for developing domain foundation models through pretraining. However, unlike natural image datasets in computer vision, these neuroimaging data often exhibit high…

Computer Vision and Pattern Recognition · Computer Science 2025-12-19 Yanteng Zhang , Songheng Li , Zeyu Shen , Qizhen Lan , Lipei Zhang , Yang Liu , Vince Calhoun

Heterogeneous presentation of a neurological disorder suggests potential differences in the underlying pathophysiological changes that occur in the brain. We propose to model heterogeneous patterns of functional network differences using a…

Machine Learning · Computer Science 2021-04-16 Nicha C. Dvornek , Xiaoxiao Li , Juntang Zhuang , Pamela Ventola , James S. Duncan

Segmentation of focal (localized) brain pathologies such as brain tumors and brain lesions caused by multiple sclerosis and ischemic strokes are necessary for medical diagnosis, surgical planning and disease development as well as other…

Computer Vision and Pattern Recognition · Computer Science 2017-01-25 Mohammad Havaei , Nicolas Guizard , Hugo Larochelle , Pierre-Marc Jodoin

Many media are divided into elementary units with irregular shape and size, as exemplified by domains in magnetic materials, bubbles in foams, or cells in biological tissues. Such media are essentially characterized by geometrical disorder…

Biological Physics · Physics 2021-04-21 Antoine Fruleux , Arezki Boudaoud