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Traditional approaches to ecosystem modelling have relied on spatially homogeneous approximations to interaction, growth and death. More recently, spatial interaction and dispersal have also been considered. While these leads to certain…

Populations and Evolution · Quantitative Biology 2010-10-07 Thomas Adams \ast , Graeme Ackland , Glenn Marion , Colin Edwards

The colonisation of a soft passive material by motile cells such as bacteria is common in biology. The resulting colonies of the invading cells are often observed to exhibit intricate patterns whose morphology and dynamics can depend on a…

Soft Condensed Matter · Physics 2021-01-12 Mohammad Imaran , Mandar Inamdar , Ranganathan Prabhakar , Raghunath Chelakkot

A mutualism is an interaction where the involved species benefit from each other. We study a two-dimensional hexagonal three-state cellular automaton model of a two-species mutualistic system. The simple model is characterized by four…

Cellular Automata and Lattice Gases · Physics 2010-11-23 Andrew Adamatzky , Martin Grube

We study the dynamics of interacting agents from two distinct inter-mixed populations: One population includes active agents that follow a predetermined velocity field, while the second population contains exclusively passive agents, i.e.…

Numerical Analysis · Mathematics 2018-06-07 Matteo Colangeli , Adrian Muntean , Omar Richardson , Thoa Thieu

Numerical models indicate that collective animal behaviour may emerge from simple local rules of interaction among the individuals. However, very little is known about the nature of such interaction, so that models and theories mostly rely…

Populations and Evolution · Quantitative Biology 2009-11-13 M. Ballerini , N. Cabibbo , R. Candelier , A. Cavagna , E. Cisbani , I. Giardina , V. Lecomte , A. Orlandi , G. Parisi , A. Procaccini , M. Viale , V. Zdravkovic

Universality in the behavior of complex systems often reveals itself in the form of scale-invariant distributions that are essentially independent of the details of the microscopic dynamics. A representative paradigm of complex behavior in…

Statistical Mechanics · Physics 2007-05-23 G. Malescio , N. V. Dokholyan , S. V. Buldyrev , H. Eugene Stanley

The spatial organization of individuals and their interactions in communities are important factors known to preserve diversity in many complex systems. Inspired by metapopulation models from ecology, we study opinion formation using a…

Physics and Society · Physics 2026-05-19 Tim Mauch , Thilo Gross

Self-organization, the ability of a system of microscopically interacting entities to shape macroscopically ordered structures, is ubiquitous in Nature. Spatio-temporal patterns are abundantly observed in a large plethora of applications,…

Pattern Formation and Solitons · Physics 2019-06-17 Malbor Asllani , Timoteo Carletti , Duccio Fanelli , Philip K. Maini

We demonstrate particle clustering on macroscopic scales in a coupled nonequilibrium system where two species of particles are advected by a fluctuating landscape and modify the landscape in the process. The phase diagram generated by…

Statistical Mechanics · Physics 2016-05-24 Shauri Chakraborty , Sukla Pal , Sakuntala Chatterjee , Mustansir Barma

Collective phenomena emerge from the interaction of natural or artificial units with a complex organization. The interplay between structural patterns and dynamics might induce functional clusters that, in general, are different from…

Physics and Society · Physics 2017-04-25 Manlio De Domenico

Self-organization is the generation of order out of local interactions in non-equilibrium [1]. It is deeply connected to all fields of science from physics, chemistry to biology where functional living structures self-assemble[2] and…

Soft Condensed Matter · Physics 2018-10-24 Utsab Khadka , Viktor Holubec , Haw Yang , Frank Cichos

Systems composed of distinct complex networks are present in many real-world environments, from society to ecological systems. In the present paper, we propose a network model obtained as a consequence of interactions between two species…

Biological Physics · Physics 2007-08-08 Luis Enrique Correa da Rocha , Luciano da Fontoura Costa

Population-level scaling in ecological systems arises from individual growth and death with competitive constraints. We build on a minimal dynamical model of metabolic growth where the tension between individual growth and mortality…

Populations and Evolution · Quantitative Biology 2022-05-11 Edward D. Lee , Christopher P. Kempes , Geoffrey B. West

A two-species spatially extended system of hosts and parasitoids is studied. There are two distinct kinds of coexistence; one with populations distributed homogeneously in space and another one with spatiotemporal patterns. In the latter…

Populations and Evolution · Quantitative Biology 2009-02-19 Matti Peltomaki , Martin Rost , Mikko Alava

We present a model of soft active particles that leads to a rich array of collective behavior found also in dense biological swarms of bacteria and other unicellular organisms. Our model uses only local interactions, such as Vicsek-type…

Soft Condensed Matter · Physics 2016-10-13 Ruben van Drongelen , Anshuman Pal , Carl P. Goodrich , Timon Idema

Scaling has been proposed as a powerful tool to analyze the properties of complex systems, and in particular for cities where it describes how various properties change with population. The empirical study of scaling on a wide range of…

Physics and Society · Physics 2018-04-18 Jules Depersin , Marc Barthelemy

Enhancement of the predictive power and robustness of nonlinear population dynamics models allows ecologists to make more reliable forecasts about species' long term survival. However, the limited availability of detailed ecological data,…

Pattern Formation and Solitons · Physics 2025-04-18 Indrajyoti Gaine , Malay Banerjee

A new model that describes adsorption and clustering of particles on a surface is introduced. A {\it clustering} transition is found which separates between a phase of weakly correlated particle distributions and a phase of strongly…

Statistical Mechanics · Physics 2009-10-31 Ofer Biham , Ofer Malcai , Daniel A. Lidar , David Avnir

Rotating clusters or vortices are formations of agents that rotate around a common center. These patterns may be found in very different contexts: from swirling fish to surveillance drones. Here, we propose a minimal model for…

Adaptation and Self-Organizing Systems · Physics 2023-05-16 Julia Cantisán , Jesús M. Seoane , Miguel A. F. Sanjuán

We study an individual based model describing competition in space between two different alleles. Although the model is similar in spirit to classic models of spatial population genetics such as the stepping stone model, here however space…

Populations and Evolution · Quantitative Biology 2015-03-20 Simone Pigolotti , Roberto Benzi , Prasad Perlekar Mogens H. Jensen , Federico Toschi , David R. Nelson