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We propose RoBiRank, a ranking algorithm that is motivated by observing a close connection between evaluation metrics for learning to rank and loss functions for robust classification. The algorithm shows a very competitive performance on…

Machine Learning · Statistics 2014-08-22 Hyokun Yun , Parameswaran Raman , S. V. N. Vishwanathan

Alignment-based sequence similarity searches, while accurate for some type of sequences, can produce incorrect results when used on more divergent but functionally related sequences that have undergone the sequence rearrangements observed…

Genomics · Quantitative Biology 2015-01-21 Ivan Borozan , Stuart Watt , Vincent Ferretti

Most time series observed in practice exhibit time-varying trend (first-order) and autocovariance (second-order) behaviour. Differencing is a commonly-used technique to remove the trend in such series, in order to estimate the time-varying…

Methodology · Statistics 2022-09-07 Euan T. McGonigle , Rebecca Killick , Matthew A. Nunes

Temporal networks, i.e., networks in which the interactions among a set of elementary units change over time, can be modelled in terms of time-varying graphs, which are time-ordered sequences of graphs over a set of nodes. In such graphs,…

Physics and Society · Physics 2013-06-04 Vincenzo Nicosia , John Tang , Cecilia Mascolo , Mirco Musolesi , Giovanni Russo , Vito Latora

Studying the topology of so-called real networks, that is networks obtained from sociological or biological data for instance, has become a major field of interest in the last decade. One way to deal with it is to consider that networks are…

Applications · Statistics 2010-07-27 Etienne Birmele

Learning a good distance measure for distance-based classification in time series leads to significant performance improvement in many tasks. Specifically, it is critical to effectively deal with variations and temporal dependencies in time…

Machine Learning · Computer Science 2019-10-24 Dongmin Park , Susik Yoon , Hwanjun Song , Jae-Gil Lee

The increasing occurrence of ordinal data, mainly sociodemographic, led to a renewed research interest in ordinal regression, i.e. the prediction of ordered classes. Besides model accuracy, the interpretation of these models itself is of…

Machine Learning · Computer Science 2019-02-21 Lukas Pfannschmidt , Jonathan Jakob , Michael Biehl , Peter Tino , Barbara Hammer

This article analyzes the problem of estimating the time until an event occurs, also known as survival modeling. We observe through substantial experiments on large real-world datasets and use-cases that populations are largely…

Machine Learning · Computer Science 2019-05-13 David Hubbard , Benoit Rostykus , Yves Raimond , Tony Jebara

Despite advances in representation learning, high-dimensional classification remains challenging in low-sample-size regimes, where the dominant signal may vary across applications and labeled data are often limited. We propose a…

Methodology · Statistics 2026-05-18 Xiangbo Mo , Hao Chen

Similarity is a comparative-subjective measure that varies with the domain within which it is considered. In several NLP applications such as document classification, pattern recognition, chatbot question-answering, sentiment analysis,…

Machine Learning · Computer Science 2021-11-11 Manuela Nayantara Jeyaraj , Dharshana Kasthurirathna

We present new algorithms for the problem of multiple string matching of gapped patterns, where a gapped pattern is a sequence of strings such that there is a gap of fixed length between each two consecutive strings. The problem has…

Data Structures and Algorithms · Computer Science 2014-07-08 Emanuele Giaquinta , Kimmo Fredriksson , Szymon Grabowski , Alexandru I. Tomescu , Esko Ukkonen

The problem of testing the equality of the generating processes of two categorical time series is addressed in this work. To this aim, we propose three tests relying on a dissimilarity measure between categorical processes. Particular…

Methodology · Statistics 2023-05-02 Ángel López-Oriona , José Antonio Vilar Fernández , Pierpaolo D'Urso

Similarity functions measure how comparable pairs of elements are, and play a key role in a wide variety of applications, e.g., notions of Individual Fairness abiding by the seminal paradigm of Dwork et al., as well as Clustering problems.…

Machine Learning · Computer Science 2023-10-24 Leonidas Tsepenekas , Ivan Brugere , Freddy Lecue , Daniele Magazzeni

The arithmetic mean plays a central role in science and technology, being directly related to the concepts of statistical expectance and centrality. Yet, it is highly susceptible to the presence of outliers or biased interference in the…

Data Analysis, Statistics and Probability · Physics 2024-10-16 Gonzalo Travieso , Luciando da F. Costa

Detecting anomalies and the corresponding root causes in multivariate time series plays an important role in monitoring the behaviors of various real-world systems, e.g., IT system operations or manufacturing industry. Previous anomaly…

Machine Learning · Computer Science 2022-09-30 Wenzhuo Yang , Kun Zhang , Steven C. H. Hoi

Explaining the predictions made by complex machine learning models helps users to understand and accept the predicted outputs with confidence. One promising way is to use similarity-based explanation that provides similar instances as…

Machine Learning · Computer Science 2021-03-24 Kazuaki Hanawa , Sho Yokoi , Satoshi Hara , Kentaro Inui

Background: DNA, RNA, and protein sequence motifs can be recognition sites for biological functions such as regulation, DNA base modification, and molecular binding in general. The gain and loss of such motifs can carry important…

Genomics · Quantitative Biology 2022-10-19 Afif Elghraoui , Faramarz Valafar

Despite large language models' (LLMs) recent advancements, their bias and hallucination issues persist, and their ability to offer consistent preferential rankings remains underexplored. This study investigates the capacity of LLMs to…

Computation and Language · Computer Science 2024-10-14 Xiutian Zhao , Ke Wang , Wei Peng

Multivariate processes with long-range dependent properties are found in a large number of applications including finance, geophysics and neuroscience. For real data applications, the correlation between time series is crucial. Usual…

Statistics Theory · Mathematics 2015-11-02 Sophie Achard , Irène Gannaz

Temporal graphs are structures which model relational data between entities that change over time. Due to the complex structure of data, mining statistically significant temporal subgraphs, also known as temporal motifs, is a challenging…

Social and Information Networks · Computer Science 2021-10-05 Antonio Longa , Giulia Cencetti , Bruno Lepri , Andrea Passerini