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Related papers: Cylindrical confinement of semiflexible polymers

200 papers

We study the motion of a charged quantum particle, constrained on the surface of a cylinder, in the presence of a radial magnetic field. When the spin of the particle is neglected, the system essentially reduces to an infinite family of…

Quantum Physics · Physics 2007-05-23 C. Chryssomalakos , A. Franco , A. Reyes-Coronado

We study the interplay between entropy and topological constraints for a polymer chain in which sliding rings (slip-links) enforce pair contacts between monomers. These slip-links divide a closed ring polymer into a number of sub-loops…

Statistical Mechanics · Physics 2009-11-07 Ralf Metzler , Andreas Hanke , Paul G. Dommersnes , Yacov Kantor , Mehran Kardar

In a closed system, the total number of particles is fixed. We ask how much does this conservation law restrict the amount of entanglement that can be created. We derive a tight upper bound on the bipartite entanglement entropy in closed…

Quantum Physics · Physics 2020-02-18 Dana Faiez , Dominik Šafránek

Loop formation between monomers in the interior of semiflexible chains describes elementary events in biomolecular folding and DNA bending. We calculate analytically the interior distance distribution function for semiflexible chains using…

Soft Condensed Matter · Physics 2009-11-11 Changbong Hyeon , D. Thirumalai

A submerged finite cylinder moving under its own weight along a soft incline lifts off and slides at a steady velocity while also spinning. Here, we experimentally quantify the steady spinning of the cylinder and show theoretically that it…

A growing or shrinking disc will adopt a conical shape, its intrinsic geometry characterized by a surplus angle $se$ at the apex. If growth is slow, the cone will find its equilibrium. Whereas this is trivial if $se <= 0$, the disc can fold…

Other Condensed Matter · Physics 2008-10-14 Martin Michael Mueller , Martine Ben Amar , Jemal Guven

The ground-state properties of a few spin-1/2 fermions with different masses and interacting via short-range contact forces are studied within an exact diagonalization approach. It is shown that, depending on the shape of the external…

Quantum Gases · Physics 2016-10-21 Daniel Pęcak , Tomasz Sowiński

Quantum coherence of electrons interacting via the magnetostatic coupling and confined to a mesoscopic cylinder is discussed. The electromagnetic response of a system is studied. It is shown that the electromagnetic kernel has finite low…

Mesoscale and Nanoscale Physics · Physics 2009-10-30 M. Stebelski , M. Lisowski , E. Zipper

We study energy relaxation in a phenomenological model for polymer built from rheological considerations: a one dimensional nonlinear lattice with dissipative couplings. These couplings are well known in polymer's community to be possibly…

Statistical Mechanics · Physics 2009-11-07 F. Gobet , S. Ciliberto , T. Dauxois

Stationary whirling of slender and homogeneous (continuous) elastic shafts rotating around their axis, with pin-pin boundary condition at the ends, is revisited by considering the complete deformations in the cross section of the shaft. The…

Soft Condensed Matter · Physics 2020-03-18 S. Mora

We study the energy structure and dynamics of a two-level emitter (2LE) locally coupled to a semi-infinite one-dimensional (1D) coupled-resonator array (CRA). The energy spectrum in the single-excitation subspace features a continuous band…

Quantum Physics · Physics 2025-04-04 Qinglian Fu , Jing Li , Jing Lu , Zhihui Peng , Lan Zhou

Inspired by recent experiments on the spatial organization of bacterial chromosomes, we consider a type of "bottle brush" polymer consisting of a flexible backbone chain, to which flexible side loops are connected. We show that such a model…

Biological Physics · Physics 2012-07-10 Debasish Chaudhuri , Bela M. Mulder

It is well known that an exponentially localized Hamiltonian must be gapless if its ground state has algebraic correlations. We show that even certain exponentially decaying correlations can imply gaplessness. This is exemplified by the…

Strongly Correlated Electrons · Physics 2025-04-29 Rahul Sahay , Curt von Keyserlingk , Ruben Verresen , Carolyn Zhang

We calculate electronic states on a closed cylindrical surface as a model of a core-shell nanowire. The length of the cylinder can be infinite or finite. We define cardinal points on the circumference of the cylinder and consider a…

Mesoscale and Nanoscale Physics · Physics 2013-11-15 Andrei Manolescu , Tomas Orn Rosdahl , Sigurdur Erlingsson , Llorens Serra , Vidar Gudmundsson

We consider collective dynamics of self-propelling particles in two dimensions. They can align themselves according to the direction of propulsion of their neighbours, together with a random perturbation (i.e. rotational fluctuation). They…

Soft Condensed Matter · Physics 2019-04-01 Shubhashis Rana , Md. Samsuzzaman , Arnab Saha

The properties of a hinged floating elastic sheet of finite length under compression are considered. Numerical continuation is used to compute spatially localized buckled states with many spatially localized folds. Both symmetric and…

Pattern Formation and Solitons · Physics 2019-04-24 Leonardo Gordillo , Edgar Knobloch

Semiflexible polymer models are widely used as a paradigm to understand structural phases in biomolecules including folding of proteins. Since stable knots are not so common in real proteins, the existence of stable knots in semiflexible…

Soft Condensed Matter · Physics 2021-07-14 Suman Majumder , Martin Marenz , Subhajit Paul , Wolfhard Janke

The interplay of topological constraints and Coulomb interactions in static and dynamic properties of charged polymers is investigated by numerical simulations and scaling arguments. In the absence of screening, the long-range interaction…

Statistical Mechanics · Physics 2009-11-07 Paul G. Dommersnes , Yacov Kantor , Mehran Kardar

In this paper, the looping kinetics of a long polymer chain in solution has been investigated by using two state model, where one state represents open chain polymer molecule and the other represents closed chain polymer molecule. The…

Soft Condensed Matter · Physics 2017-05-24 Moumita Ganguly , Aniruddha Chakraborty

A crystal lattice, when confined to the surface of a cylinder, must have a periodic structure that is commensurate with the cylinder circumference. This constraint can frustrate the system, leading to oblique crystal lattices or to…

Soft Condensed Matter · Physics 2013-07-03 D. A. Wood , C. D. Santangelo , A. D. Dinsmore