Related papers: Generalized robust toric ideals
Characteristic imsets are 0-1 vectors which correspond to Markov equivalence classes of directed acyclic graphs. The study of their convex hull, named the characteristic imset polytope, has led to new and interesting geometric perspectives…
In combinatorial commutative algebra and algebraic statistics many toric ideals are constructed from graphs. Keeping the categorical structure of graphs in mind we give previous results a more functorial context and generalize them by…
In this paper we give an explicit and algorithmic description of Graver basis for the toric ideal associated with a simple undirected graph and apply the basis for testing the beta model of random graphs by Markov chain Monte Carlo method.
In this paper, we study toric ideals associated with multichains of posets. It is shown that the comparability graph of a poset is chordal if and only if there exists a quadratic Gr\"obner basis of the toric ideal of the poset. Strong…
A graph-theoretic method, simpler than existing ones, is used to characterize the minimal set of monomial generators for the integral closure of any algebra of polynomials generated by quadratic monomials. The toric ideal of relations…
Let $G$ be a simple graph on the vertex set $\{1,\ldots,n\}$ with $m$ edges. An algebraic object attached to $G$ is the ideal $P_{G}$ generated by diagonal 2-minors of an $n \times n$ matrix of variables. In this paper we prove that if $G$…
We introduce some determinantal ideals of the generalized Laplacian matrix associated to a digraph G, that we call critical ideals of G. Critical ideals generalize the critical group and the characteristic polynomials of the adjacency and…
Let $G$ be a simple graph on the vertex set $\{v_{1},\ldots,v_{n}\}$. An algebraic object attached to $G$ is the toric ideal $I_G$. We say that $I_G$ is subgraph splittable if there exist subgraphs $G_1$ and $G_2$ of $G$ such that…
Let I be the toric ideal of a homogeneous normal configuration. We prove that I is generated by circuits if and only if each unbalanced circuit of I has a "connector" which is a linear combination of circuits with a square-free term. In…
The geometric vertex decomposability property for polynomial ideals is an ideal-theoretic generalization of the vertex decomposability property for simplicial complexes. Indeed, a homogeneous geometrically vertex decomposable ideal is…
We prove that for any toric ideal of a graph the degree of any element of Graver basis is bounded above by an exponential function of the maximal degree of a circuit.
We consider the Graver basis, the universal Groebner basis, a Markov basis and the set of the circuits of a toric ideal. Let $A, B$ be any two of these bases such that $A\not \subset B$, we prove that there is no polynomial on the size or…
We classify the finite connected simple graphs whose edge rings are strongly Koszul. From the classification, it follows that if the edge ring is strongly Koszul, then its toric ideal possesses a quadratic Gr\"obner basis.
A typical result in graph theory says that a graph $G$, satisfying certain conditions, has some property $\cal P$. Once such a theorem is established, it is natural to ask how strongly $G$ satisfies $\cal P$. Can one strengthen the result…
Two correspondences have been provided that associate any linear code over a finite field with a binomial ideal. In this paper, algorithms for computing their Graver bases and universal Gr\"obner bases are given. To this end, a connection…
Let $I \subseteq R = \mathbb{K}[x_1,\ldots,x_n]$ be a toric ideal, i.e., a binomial prime ideal. We investigate when the ideal $I$ can be "split" into the sum of two smaller toric ideals. For a general toric ideal $I$, we give a sufficient…
Let $G$ be a finite graph allowing loops, having no multiple edge and no isolated vertex. We associate $G$ with the edge polytope ${\cal P}_G$ and the toric ideal $I_G$. By classifying graphs whose edge polytope is simple, it is proved that…
We give a necessary and sufficient graph-theoretic characterization of toric ideals of graphs that are unimodular. As a direct consequence, we provide the structure of unimodular graphs by proving that the incidence matrix of a graph $G$ is…
Relying on the combinatorial classification of toric ideals using their bouquet structure, we focus on toric ideals of hypergraphs and study how they relate to general toric ideals. We show that hypergraphs exhibit a surprisingly general…
In this article we prove that every toric ideal associated with a gap-free graph $G$ has a squarefree lexicographic initial ideal. Moreover, in the particular case when the complementary graph of $G$ is chordal (i.e. when the edge ideal of…