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We introduce a model of DNA sequence evolution which can account for biases in mutation rates that depend on the identity of the neighboring bases. An analytic solution for this class of non-equilibrium models is developed by adopting…

Biological Physics · Physics 2007-05-23 Peter F. Arndt , Christopher B. Burge , Terence Hwa

Atomic-scale control of light-matter interactions represent the ultimate frontier for many applications in photonics and quantum technology. Two-dimensional semiconductors, including transition metal dichalcogenides, are a promising…

Mesoscale and Nanoscale Physics · Physics 2024-08-22 John M. Woods , Saroj B. Chand , Enrique Mejia , Takashi Taniguchi , Kenji Watanabe , Johannes Flick , Gabriele Grosso

We study the phase behavior of random heteropolymers (RHPs) with quenched cross-links, a novel polymer class of technological and biological relevance, and show the possible occurrence of freezing with few chain conformations sampled. The…

Statistical Mechanics · Physics 2009-10-31 L. Gutman , E. I. Shakhnovich

Color-center-hosting semiconductors are emerging as promising source materials for low-field dynamic nuclear polarization (DNP) at or near room temperature, but hyperfine broadening, susceptibility to magnetic field heterogeneity, and…

Quantum Physics · Physics 2022-06-01 J. Henshaw , D. Pagliero , P. R. Zangara , B. Franzoni , A. Ajoy , R. Acosta , J. A. Reimer , A. Pines , C. A. Meriles

Homogenized laws for sequences of high-contrast two-phase non-symmetric conductivities perturbed by a parameter $h$ are derived in two and three dimensions. The parameter $h$ characterizes the antisymmetric part of the conductivity for an…

Analysis of PDEs · Mathematics 2011-12-20 Marc Briane , Laurent Pater

We investigate a high-order homogenization (HOH) algorithm for periodic multilayered stacks. The mathematical tool of choice is a transfer matrix method. Expressions for effective permeability, permittivity and magnetoelectric coupling are…

Mesoscale and Nanoscale Physics · Physics 2013-04-26 Yan Liu , Sébastien Guenneau , Boris Gralak

Distant dipolar field (DDF)-based nuclear magnetic resonance is an active research area with many fundamental properties still not well understood. Already several intriguing applications have developed, like HOMOGENIZED and IDEAL…

Medical Physics · Physics 2009-09-29 Curtis Andrew Corum

Quantum information is often carried in the frequency and polarization degrees of freedom (DoFs) in single photons and entangled photons. We demonstrate a new approach to couple and decouple the frequency and polarization DoFs of broadband…

Quantum Physics · Physics 2023-11-27 Arash Riazi , Eric Y. Zhu , Dan Xu , Li Qian

A sensitivity increase of two orders of magnitude in proton (1H) and carbon (13C) spins via dynamic nuclear polarization (DNP) has been accomplished recently using a compact benchtop DNP polarizer operating at 1 T and 77 K. However the DNP…

Given a unital action $\theta $ of an inverse monoid $S$ on an algebra $A$ over a filed $K$ we produce (co)homology spectral sequences which converge to the Hochschild (co)homology of the crossed product $A\rtimes_\theta S$ with values in a…

Rings and Algebras · Mathematics 2026-02-24 Mikhailo Dokuchaev , Mykola Khrypchenko , Juan Jacobo Simón

We report the first study of time-resolved high-harmonic spectroscopy (TR-HHS) of a bond-making chemical reaction. We investigate the transient change of the high harmonic signal from 1,3-cyclohexadiene (CHD), which undergoes ring-opening…

Chemical Physics · Physics 2018-12-05 Keisuke Kaneshima , Yuki Ninota , Taro Sekikawa

The optimally doped and underdoped region of the $t-J$ model at large N (N is the number of spin components) is governed by the competition of d-wave superconductivity (SC) and a d Charge-Density Wave (d-CDW).The partial destruction of the…

Superconductivity · Physics 2010-06-16 A. Greco , R. Zeyher

The investigation of the static and dynamic structural properties of colloidal systems relies on techniques capable of atomic resolution in real space and femtosecond resolution in time. Recently, the cross-correlation function (CCF)…

Other Condensed Matter · Physics 2015-11-20 Tatiana Latychevskaia , Giulia Fulvia Mancini , Fabrizio Carbone

Semiconductor quantum dot molecules are considered as promising candidates for quantum technological applications due to their wide tunability of optical properties and coverage of different energy scales associated with charge and spin…

Magnetic resonance spectroscopic imaging (SI) is a unique imaging technique that provides biochemical information from in vivo tissues. The 1H spectra acquired from several spatial regions are quantified to yield metabolite concentrations…

Medical Physics · Physics 2019-10-23 Zohaib Iqbal , Dan Nguyen , Gilbert Hangel , Stanislav Motyka , Wolfgang Bogner , Steve Jiang

Magnetic dipole bands have been identified in 142,143,144Gd and 141Eu nuclei. The observed bands are based on configurations with small oblate deformation involving high-Omega, h11/2 proton particles and low-Omega, h11/2 neutron holes.…

Nuclear Theory · Physics 2007-05-23 Teresa Rzaca-Urban

The dynamics of a loop in DNA molecules at the denaturation transition is studied by scaling arguments and numerical simulations. The autocorrelation function of the state of complementary bases (either closed or open) is calculated. The…

Statistical Mechanics · Physics 2009-11-11 A. Bar , Y. Kafri , D. Mukamel

The effect of a magnetic (S=1/2) impurity coupled to a 2D system of correlated electrons (described by the t--J model) is studied by exact diagonalisations. It is found that, if the exchange coupling of the impurity with the neighboring…

Condensed Matter · Physics 2016-08-31 D. Poilblanc , D. J. Scalapino , W. Hanke

High harmonic generation (HHG) provides a flexible framework for the development of coherent light sources in the extreme-ultraviolet and soft x-ray regimes. However it suffers from low conversion efficiencies as the control of the HHG…

Optics · Physics 2014-09-16 Alberto Castro , Angel Rubio , E. K. U. Gross

Gel electrophoresis is a powerful experimental method to probe the topology of DNA and other biopolymers. While there is a large body of experimental work which allows us to accurately separate different topoisomers of a molecule, a full…

Soft Condensed Matter · Physics 2016-02-17 Davide Michieletto , Davide Marenduzzo , Enzo Orlandini