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The palindromic tree (a.k.a. eertree) is a data structure that provides access to all palindromic substrings of a string. In this paper, we propose a dynamic version of eertree, called double-ended eertree, which supports online operations…

Data Structures and Algorithms · Computer Science 2025-11-25 Qisheng Wang , Ming Yang , Xinrui Zhu

General graphs are difficult for learning due to their irregular structures. Existing works employ message passing along graph edges to extract local patterns using customized graph kernels, but few of them are effective for the integration…

Computer Vision and Pattern Recognition · Computer Science 2020-07-23 Yecheng Lyu , Ming Li , Xinming Huang , Ulkuhan Guler , Patrick Schaumont , Ziming Zhang

Recovering a tree that represents the evolutionary history of a group of species is a key task in phylogenetics. Performing this task using sequence data from multiple genetic markers poses two key challenges. The first is the discordance…

Populations and Evolution · Quantitative Biology 2026-03-12 Ortal Reshef , Ofer Glassman , Or Zuk , Yariv Aizenbud , Boaz Nadler , Ariel Jaffe

We propose an extension of tree-based space-partitioning indexing structures for data with low intrinsic dimensionality embedded in a high dimensional space. We call this extension an Angle Tree. Our extension can be applied to both…

Data Structures and Algorithms · Computer Science 2010-04-19 Ilia Zvedeniouk , Sanjay Chawla

Since many real world networks are evolving over time, such as social networks and user-item networks, there are increasing research efforts on dynamic network embedding in recent years. They learn node representations from a sequence of…

Social and Information Networks · Computer Science 2021-03-30 Guotong Xue , Ming Zhong , Jianxin Li , Jia Chen , Chengshuai Zhai , Ruochen Kong

On-demand peer-to-peer ride-sharing services provide flexible mobility options, and are expected to alleviate congestion by sharing empty car seats. An efficient matching algorithm is essential to the success of a ride-sharing system. The…

Data Structures and Algorithms · Computer Science 2021-05-28 Rui Yao , Shlomo Bekhor

As interdisciplinary science is flourishing because of materials informatics and additional factors; a systematic way is required for expressing knowledge and facilitating communication between scientists in various fields. A function…

Artificial Intelligence · Computer Science 2022-05-03 Hiori Kino , Hieu-Chi Dam , Takashi Miyake , Riichiro Mizoguchi

Age estimation from facial images is typically cast as a nonlinear regression problem. The main challenge of this problem is the facial feature space w.r.t. ages is heterogeneous, due to the large variation in facial appearance across…

Computer Vision and Pattern Recognition · Computer Science 2017-12-21 Wei Shen , Yilu Guo , Yan Wang , Kai Zhao , Bo Wang , Alan Yuille

Dual-tree algorithms are a widely used class of branch-and-bound algorithms. Unfortunately, developing dual-tree algorithms for use with different trees and problems is often complex and burdensome. We introduce a four-part logical split:…

Data Structures and Algorithms · Computer Science 2013-04-17 Ryan R. Curtin , William B. March , Parikshit Ram , David V. Anderson , Alexander G. Gray , Charles L. Isbell

Truss was proposed to study social network data represented by graphs. A k-truss of a graph is a cohesive subgraph, in which each edge is contained in at least k-2 triangles within the subgraph. While truss has been demonstrated as superior…

Databases · Computer Science 2014-02-13 Rui Zhou , Chengfei Liu , Jeffrey Xu Yu , Weifa Liang , Yanchun Zhang

Measuring the complexity of tree structures can be beneficial in areas that use tree data structures for storage, communication, and processing purposes. This complexity can then be used to compress tree data structures to their…

Information Theory · Computer Science 2023-09-19 Amirmohammad Farzaneh , Mihai-Alin Badiu , Justin P. Coon

Recently it was shown that the transitive closure of a directed graph can be updated using first-order formulas after insertions and deletions of single edges in the dynamic descriptive complexity framework by Dong, Su, and Topor, and…

Logic in Computer Science · Computer Science 2018-04-25 Samir Datta , Anish Mukherjee , Nils Vortmeier , Thomas Zeume

A rectilinear Steiner tree for a set $P$ of points in $\mathbb{R}^2$ is a tree that connects the points in $P$ using horizontal and vertical line segments. The goal of Minimal Rectilinear Steiner Tree is to find a rectilinear Steiner tree…

Computational Geometry · Computer Science 2021-03-16 Henk Alkema , Mark de Berg

Conversational interfaces provide a flexible and easy way for users to seek information that may otherwise be difficult or inconvenient to obtain. However, existing interfaces generally fall into one of two categories: FAQs, where users…

Computation and Language · Computer Science 2024-03-27 Dirk Väth , Lindsey Vanderlyn , Ngoc Thang Vu

We give the first non-trivial fully dynamic probabilistic tree embedding algorithm for weighted graphs undergoing edge insertions and deletions. We obtain a trade-off between amortized update time and expected stretch against an oblivious…

Data Structures and Algorithms · Computer Science 2020-04-24 Sebastian Forster , Gramoz Goranci , Monika Henzinger

Shortest paths in treespace, which represent minimal deformations between trees, are unique and can be computed in polynomial time. The ability to quickly compute shortest paths has enabled new approaches for statistical analysis of…

Optimization and Control · Mathematics 2015-12-11 Sean Skwerer , Scott Provan

We introduce a notion for hierarchical graph clustering which we call the expander hierarchy and show a fully dynamic algorithm for maintaining such a hierarchy on a graph with $n$ vertices undergoing edge insertions and deletions using…

Data Structures and Algorithms · Computer Science 2020-07-22 Gramoz Goranci , Harald Räcke , Thatchaphol Saranurak , Zihan Tan

Suffix trees are a fundamental data structure in stringology, but their space usage, though linear, is an important problem for its applications. We design and implement a new compressed suffix tree targeted to highly repetitive texts, such…

Data Structures and Algorithms · Computer Science 2019-02-12 Manuel Cáceres , Gonzalo Navarro

Many AI problems, in robotics and other domains, are goal-directed, essentially seeking a trajectory leading to some goal state. In such problems, the way we choose to represent a trajectory underlies algorithms for trajectory prediction…

Machine Learning · Computer Science 2019-06-14 Tom Jurgenson , Edward Groshev , Aviv Tamar

We study the metric Steiner tree problem in the sublinear query model. In this problem, for a set of $n$ points $V$ in a metric space given to us by means of query access to an $n\times n$ matrix $w$, and a set of terminals $T\subseteq V$,…

Data Structures and Algorithms · Computer Science 2024-11-15 Sepideh Mahabadi , Mohammad Roghani , Jakub Tarnawski , Ali Vakilian