English
Related papers

Related papers: Fast and asymptotic computation of the fixation pr…

200 papers

Computing the rate of evolution in spatially structured populations is difficult. A key quantity is the fixation time of a single mutant with relative reproduction rate $r$ which invades a population of residents. We say that the fixation…

Populations and Evolution · Quantitative Biology 2025-09-18 David A. Brewster , Martin A. Nowak , Josef Tkadlec

Evolutionary graph theory (EGT) studies the effect of population structure on evolutionary dynamics. The vertices of the graph represent the $N$ individuals. The edges denote interactions for competitive replacement. Two standard update…

Populations and Evolution · Quantitative Biology 2026-04-01 David A. Brewster , Yichen Huang , Michael Mitzenmacher , Martin A. Nowak

The classic technique of Baker [J. ACM '94] is the most fundamental approach for designing approximation schemes on planar, or more generally topologically-constrained graphs, and it has been applied in a myriad of different variants and…

Data Structures and Algorithms · Computer Science 2023-11-01 Tuukka Korhonen , Wojciech Nadara , Michał Pilipczuk , Marek Sokołowski

We analyze the properties of degree-preserving Markov chains based on elementary edge switchings in undirected and directed graphs. We give exact yet simple formulas for the mobility of a graph (the number of possible moves) in terms of its…

Disordered Systems and Neural Networks · Physics 2012-03-12 E. S. Roberts , A. Annibale , A. C. C. Coolen

It has become increasingly easy nowadays to collect approximate posterior samples via fast algorithms such as variational Bayes, but concerns exist about the estimation accuracy. It is tempting to build solutions that exploit approximate…

Computation · Statistics 2024-06-17 Leo L. Duan , Anirban Bhattacharya

We consider the modified Moran process on graphs to study the spread of genetic and cultural mutations on structured populations. An initial mutant arises either spontaneously (aka \emph{uniform initialization}), or during reproduction (aka…

Discrete Mathematics · Computer Science 2018-05-15 Andreas Pavlogiannis , Josef Tkadlec , Krishnendu Chatterjee , Martin A. Nowak

Although asymptotic analyses of undirected network models based on degree sequences have started to appear in recent literature, it remains an open problem to study statistical properties of directed network models. In this paper, we…

Statistics Theory · Mathematics 2016-01-13 Ting Yan , Chenlei Leng , Ji Zhu

Random graph mixture models are now very popular for modeling real data networks. In these setups, parameter estimation procedures usually rely on variational approximations, either combined with the expectation-maximisation (\textsc{em})…

Statistics Theory · Mathematics 2010-12-09 Christophe Ambroise , Catherine Matias

This paper introduces graphemes for constructing and analyzing stochastic processes that describe the evolution of large dynamic graphs. Unlike graphons, which capture the static properties of dense graphs via exchangeability or subgraph…

Probability · Mathematics 2025-04-16 Andreas Greven , Frank den Hollander , Anton Klimovsky , Anita Winter

We model evolution according to an asymmetric game as occurring in multiple finite populations, one for each role in the game, and study the effect of subjecting individuals to stochastic strategy mutations. We show that, when these…

Populations and Evolution · Quantitative Biology 2015-12-22 Carl Veller , Laura K. Hayward

We give the first non-trivial decremental dynamic embedding of a weighted, undirected graph $G$ into $\ell_p$ space. Given a weighted graph $G$ undergoing a sequence of edge weight increases, the goal of this problem is to maintain a…

Data Structures and Algorithms · Computer Science 2024-08-15 Kiarash Banihashem , MohammadTaghi Hajiaghayi , Dariusz R. Kowalski , Jan Olkowski , Max Springer

We investigate the computational complexity of the exponential random graph model (ERGM) commonly used in social network analysis. This model represents a probability distribution on graphs by setting the log-likelihood of generating a…

Data Structures and Algorithms · Computer Science 2014-12-05 Michael J. Bannister , William E. Devanny , David Eppstein

Graph embeddings play a critical role in graph representation learning, allowing machine learning models to explore and interpret graph-structured data. However, existing methods often rely on opaque, high-dimensional embeddings, limiting…

Machine Learning · Computer Science 2025-11-26 Astrit Tola , Funmilola Mary Taiwo , Cuneyt Gurcan Akcora , Baris Coskunuzer

Doubly intractable distributions arise in many settings, for example in Markov models for point processes and exponential random graph models for networks. Bayesian inference for these models is challenging because they involve intractable…

Computation · Statistics 2019-04-03 Jaewoo Park , Murali Haran

A permutation of [n] induces a graph on [n] such that the edges of the graph correspond to inversion pairs of the permutation. This graph is connected if and only if the corresponding permutation is indecomposable. Let s(n,m) denote a…

Combinatorics · Mathematics 2013-09-19 Huseyin Acan , Boris Pittel

To our knowledge, the populations are generally assumed to be homogeneous in the traditional approach to evolutionary game dynamics. Here, we focus on the inhomogeneous populations. A simple model which can describe the inhomogeneity of the…

Physics and Society · Physics 2007-05-23 Xiaojie Chen , Feng Fu , Long Wang , Tianguang Chu

Markov chains are simple yet powerful mathematical structures to model temporally dependent processes. They generally assume stationary data, i.e., fixed transition probabilities between observations/states. However, live, real-world…

Machine Learning · Computer Science 2024-11-27 Kutalmış Coşkun , Borahan Tümer , Bjarne C. Hiller , Martin Becker

A random 2-cell embedding of a connected graph $G$ in some orientable surface is obtained by choosing a random local rotation around each vertex. Under this setup, the number of faces or the genus of the corresponding 2-cell embedding…

Combinatorics · Mathematics 2025-04-11 Jesse Campion Loth , Kevin Halasz , Tomáš Masařík , Bojan Mohar , Robert Šámal

This paper considers a Markov-modulated duplication-deletion random graph where at each time instant, one node can either join or leave the network; the probabilities of joining or leaving evolve according to the realization of a finite…

Information Theory · Computer Science 2013-03-04 Maziyar Hamdi , Vikram Krishnamurthy , George Yin

In this paper we present the Markov variation, a smoothness measure which offers a probabilistic interpretation of graph signal smoothness. This measure is then used to develop an optimization framework for graph signal interpolation. Our…

Signal Processing · Electrical Eng. & Systems 2020-01-29 Ayelet Heimowitz , Yonina C. Eldar