Related papers: Development of a Big Data Framework for Connectomi…
Distributed learning is widely used for training large models on large datasets by distributing parts of the model or dataset across multiple devices and aggregating the computed results for subsequent computations or parameter updates.…
With the ever-increasing range of applications of Internet in Things (IoT) and sensor networks, challenges are emerging in various categories of classification tasks. Applications such as vehicular networking, UAV swarm coordination and…
Early-stage 3D brain tumor segmentation from magnetic resonance imaging (MRI) scans is crucial for prompt and effective treatment. However, this process faces the challenge of precise delineation due to the tumors' complex heterogeneity.…
Object segmentation and structure localization are important steps in automated image analysis pipelines for microscopy images. We present a convolution neural network (CNN) based deep learning architecture for segmentation of objects in…
We tackle classification based on brain connectivity derived from diffusion magnetic resonance images. We propose a machine-learning model inspired by graph convolutional networks (GCNs), which takes a brain connectivity input graph and…
Small cell enchantment is emerging as the key technique for wireless network evolution. One challenging problem for small cell enhancement is how to achieve high data rate with as-low-as-possible control and computation overheads. As a…
Advances in networking and computing technologies throughout the early decades of the 21st century have transformed long-standing dreams of pervasive communication and computation into reality. These technologies now form a rapidly evolving…
Objective: The advent of High-Performance Computing (HPC) in recent years has led to its increasing use in brain study through computational models. The scale and complexity of such models are constantly increasing, leading to challenging…
Efforts to automate the reconstruction of neural circuits from 3D electron microscopic (EM) brain images are critical for the field of connectomics. An important computation for reconstruction is the detection of neuronal boundaries. Images…
To build the connectomics map of the brain, we developed a new algorithm that can automatically refine the Membrane Detection Probability Maps (MDPM) generated to perform automatic segmentation of electron microscopy (EM) images. To achieve…
Cytoarchitecture describes the spatial organization of neuronal cells in the brain, including their arrangement into layers and columns with respect to cell density, orientation, or presence of certain cell types. It allows to segregate the…
Today, big data is generated from many sources and there is a huge demand for storing, managing, processing, and querying on big data. The MapReduce model and its counterpart open source implementation Hadoop, has proven itself as the de…
Nowadays distributed computing environments, large amounts of data are generated from different resources with a high velocity, rendering the data difficult to capture, manage, and process within existing relational databases. Hadoop is a…
Large scale graph processing using distributed computing frameworks is becoming pervasive and efficient in the industry. In this work, we present a highly scalable and configurable distributed algorithm for building connected components,…
This article focuses on the problem of studying shared- and individual-specific structure in replicated networks or graph-valued data. In particular, the observed data consist of $n$ graphs, $G_i, i=1,\ldots,n$, with each graph consisting…
Automated sample preparation and electron microscopy enables acquisition of very large image data sets. These technical advances are of special importance to the field of neuroanatomy, as 3D reconstructions of neuronal processes at the nm…
Big imaging data is becoming more prominent in brain sciences across spatiotemporal scales and phylogenies. We have developed a computational ecosystem that enables storage, visualization, and analysis of these data in the cloud, thusfar…
Functional MRI (fMRI) and diffusion MRI (dMRI) are non-invasive imaging modalities that allow in-vivo analysis of a patient's brain network (known as a connectome). Use of these technologies has enabled faster and better diagnoses and…
For highly distributed environments such as edge computing, collaborative learning approaches eschew the dependence on a global, shared model, in favor of models tailored for each location. Creating tailored models for individual learning…
As deep neural networks (DNNs) grow in complexity and size, the resultant increase in communication overhead during distributed training has become a significant bottleneck, challenging the scalability of distributed training systems.…