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Tree-width is an invaluable tool for computational problems on graphs. But often one would like to compute on other kinds of objects (e.g. decorated graphs or even algebraic structures) where there is no known tree-width analogue. Here we…

Combinatorics · Mathematics 2022-06-22 Benjamin Merlin Bumpus , Zoltan A. Kocsis

The complicated syntax structure of natural language is hard to be explicitly modeled by sequence-based models. Graph is a natural structure to describe the complicated relation between tokens. The recent advance in Graph Neural Networks…

Computation and Language · Computer Science 2019-09-19 Wei Li , Shuheng Li , Shuming Ma , Yancheng He , Deli Chen , Xu Sun

We present a family of neural-network--inspired models for computing continuous word representations, specifically designed to exploit both monolingual and multilingual text. This framework allows us to perform unsupervised training of…

Computation and Language · Computer Science 2016-12-15 Radu Soricut , Nan Ding

A graph $G$ with vertex set $V(G)$ and edge set $E(G)$ is said to be word-representable if there exists a word $w$ over the alphabet $V(G)$ such that, for any two distinct letters $x,y \in V(G)$, the letters $x$ and $y$ alternate in $w$ if…

Combinatorics · Mathematics 2026-04-14 Eshwar Srinivasan , Ramesh Hariharasubramanian

Many real life networks present an average path length logarithmic with the number of nodes and a degree distribution which follows a power law. Often these networks have also a modular and self-similar structure and, in some cases -…

Physics and Society · Physics 2010-02-17 Alicia Miralles , Francesc Comellas , Lichao Chen , Zhongzhi Zhang

We propose the use of hyperedge replacement graph grammars for factor graphs, or factor graph grammars (FGGs) for short. FGGs generate sets of factor graphs and can describe a more general class of models than plate notation, dynamic…

Machine Learning · Computer Science 2020-10-26 David Chiang , Darcey Riley

Mock threshold graphs are a simple generalization of threshold graphs that, like threshold graphs, are perfect graphs. Our main theorem is a characterization of mock threshold graphs by forbidden induced subgraphs. Other theorems…

Combinatorics · Mathematics 2021-06-16 Richard Behr , Vaidy Sivaraman , Thomas Zaslavsky

We develop a theory of rewriting for structured cospans in order to extend compositional methods for modeling open networks. First, we introduce a category whose objects are structured cospans, and establish conditions under which it is…

Category Theory · Mathematics 2026-04-06 Daniel Cicala

In recent years, diagrammatic languages have been shown to be a powerful and expressive tool for reasoning about physical, logical, and semantic processes represented as morphisms in a monoidal category. In particular, categorical quantum…

Artificial Intelligence · Computer Science 2012-04-19 Aleks Kissinger

Counterfactual explanations promote explainability in machine learning models by answering the question "how should an input instance be perturbed to obtain a desired predicted label?". The comparison of this instance before and after…

Machine Learning · Computer Science 2022-11-09 Jing Ma , Ruocheng Guo , Saumitra Mishra , Aidong Zhang , Jundong Li

For an arbitrary word $w$ on an alphabet, we can define the alternating symbol graph, $G(w)$, as the graph in which the edge $(a, b)$ is in $E$ iff the letters $a$ and $b$ alternate in the word $w$. A graph $G = (V, E)$ is said to be…

Combinatorics · Mathematics 2018-06-14 Ameya Daigavane , Mrityunjay Singh , Benny K. George

We provide a new approach to categorical graph and hypergraph theory by using categorical syntax and semantics. For each monoid $M$ and action on a set $X$, there is an associated presheaf topos of $(X,M)$-graphs where each object can be…

Combinatorics · Mathematics 2019-07-08 Martin Schmidt

It is known that context-free grammars can be extended to generating graphs resulting in graph grammars; one of such fundamental approaches is hyperedge replacement grammars. On the other hand there are type-logical grammars which also…

Logic · Mathematics 2020-10-23 Tikhon Pshenitsyn

Bayesian networks faithfully represent the symmetric conditional independences existing between the components of a random vector. Staged trees are an extension of Bayesian networks for categorical random vectors whose graph represents…

Machine Learning · Statistics 2022-03-10 Manuele Leonelli , Gherardo Varando

Graph data model and graph databases are very popular in various areas such as bioinformatics, semantic web, and social networks. One specific problem in the area is a path querying with constraints formulated in terms of formal grammars.…

Databases · Computer Science 2023-02-21 Semyon Grigorev , Anastasiya Ragozina

We propose a modal logic tailored to describe graph transformations and discuss some of its properties. We focus on a particular class of graphs called termgraphs. They are first-order terms augmented with sharing and cycles. Termgraphs…

Logic in Computer Science · Computer Science 2010-03-24 Ph. Balbiani , R. Echahed , A. Herzig

Threshold graphs are recursive deterministic network models that have been proposed for describing certain economic and social interactions. One drawback of this graph family is that it has limited generative attachment rules. To mitigate…

Social and Information Networks · Computer Science 2018-05-24 Vida Ravanmehr , Gregory J. Puleo , Sadegh Bolouki , Olgica Milenkovic

Knowledge graphs are used to represent relational information in terms of triples. To enable learning about domains, embedding models, such as tensor factorization models, can be used to make predictions of new triples. Often there is…

Machine Learning · Computer Science 2018-12-11 Bahare Fatemi , Siamak Ravanbakhsh , David Poole

Bipartite graphs are a fundamental concept in graph theory with diverse applications. A graph is bipartite iff it contains no odd cycles, a characteristic that has many implications in diverse fields ranging from matching problems to the…

Combinatorics · Mathematics 2024-12-10 Marzieh Eidi , Sayan Mukherjee

IC-planar graphs are those graphs that admit a drawing where no two crossed edges share an end-vertex and each edge is crossed at most once. They are a proper subfamily of the 1-planar graphs. Given an embedded IC-planar graph $G$ with $n$…

Computational Geometry · Computer Science 2016-07-19 Franz J. Brandenburg , Walter Didimo , William S. Evans , Philipp Kindermann , Giuseppe Liotta , Fabrizio Montecchiani