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Multivariate Hawkes processes are commonly used to model streaming networked event data in a wide variety of applications. However, it remains a challenge to extract reliable inference from complex datasets with uncertainty quantification.…

Machine Learning · Statistics 2020-10-29 Haoyun Wang , Liyan Xie , Alex Cuozzo , Simon Mak , Yao Xie

Inferring synaptic connectivity from neural population activity is a fundamental challenge in computational neuroscience, complicated by partial observability and mismatches between inference models and true circuit dynamics. In this study,…

Neurons and Cognition · Quantitative Biology 2025-10-28 Kijung Yoon

Dynamic networks have been increasingly used to characterize brain connectivity that varies during resting and task states. In such characterizations, a connectivity network is typically measured at each time point for a subject over a…

Methodology · Statistics 2023-03-23 Maoyu Zhang , Biao Cai , Wenlin Dai , Dehan Kong , Hongyu Zhao , Jingfei Zhang

Understanding neurocognitive computations will require not just localizing cognitive information distributed throughout the brain but also determining how that information got there. We review recent advances in linking empirical and…

Neurons and Cognition · Quantitative Biology 2019-10-22 Takuya Ito , Luke Hearne , Ravi Mill , Carrisa Cocuzza , Michael W. Cole

Transformer models have recently gained popularity in graph representation learning as they have the potential to learn complex relationships beyond the ones captured by regular graph neural networks. The main research question is how to…

Machine Learning · Computer Science 2023-10-31 Yuankai Luo , Veronika Thost , Lei Shi

Graph neural networks (GNNs) build on the success of deep learning models by extending them for use in graph spaces. Transfer learning has proven extremely successful for traditional deep learning problems: resulting in faster training and…

Machine Learning · Computer Science 2022-02-03 Nishai Kooverjee , Steven James , Terence van Zyl

Network control theory has recently emerged as a promising approach for understanding brain function and dynamics. By operationalizing notions of control theory for brain networks, it offers a fundamental explanation for how brain dynamics…

Quantitative Methods · Quantitative Biology 2020-03-20 Shikuang Deng , Shi Gu

This paper considers transfer functions in consensus systems where agents have identical SISO dynamics of arbitrary order. The interconnecting structure is a directed graph. The transfer functions for various inputs and outputs are…

Systems and Control · Computer Science 2015-12-17 Ivo Herman , Dan Martinec , Michael Sebek

A key question in brain sciences is how to identify time-evolving functional connectivity, such as that obtained from recordings of neuronal activity over time. We wish to explain the observed phenomena in terms of latent states which, in…

Methodology · Statistics 2026-05-14 Yiwei Gong , Susanna B. Mierau , Sinead A. Williamson

We study a fully connected Hopfield-type associative memory network with online activity-dependent synaptic plasticity, where neural states and synaptic couplings coevolve during retrieval. Using the generating-functional formalism, we…

Disordered Systems and Neural Networks · Physics 2026-05-22 Yoshinori Hara , Yoshiyuki Kabashima

Based on the formation of triad junctions, the proposed mechanism generates networks that exhibit extended rather than single power law behavior. Triad formation guarantees strong neighborhood clustering and community-level characteristics…

Physics and Society · Physics 2013-06-24 P. Moriano , J. Finke

Understanding the causal relationships between data variables can provide crucial insights into the construction of tabular datasets. Most existing causality learning methods typically focus on applying a single identifiable causal model,…

Machine Learning · Computer Science 2026-04-07 Hristo Petkov , Calum MacLellan , Feng Dong

The task of inductive link prediction in (discrete) attributed multigraphs infers missing attributed links (relations) between nodes in new test multigraphs. Traditional relational learning methods face the challenge of limited…

Machine Learning · Computer Science 2023-12-06 Jincheng Zhou , Beatrice Bevilacqua , Bruno Ribeiro

We consider distributed detection problems over adaptive networks, where dispersed agents learn continually from streaming data by means of local interactions. The simultaneous requirements of adaptation and cooperation are achieved by…

Multiagent Systems · Computer Science 2016-01-27 Vincenzo Matta , Paolo Braca , Stefano Marano , Ali H. Sayed

We present a general frame to extend functional renormalization group (fRG) based computational schemes by using an exactly solvable interacting reference problem as starting point for the RG flow. The systematic expansion around this…

Strongly Correlated Electrons · Physics 2015-02-11 Nils Wentzell , Ciro Taranto , Andrey A. Katanin , Alessandro Toschi , Sabine Andergassen

Most generally, dynamic functional connectivity (FC) refers to the non-instantaneous couplings across timeseries from a set of brain areas, here as measured by fMRI. This is in contrast to static FC, which is defined as purely instantaneous…

Neurons and Cognition · Quantitative Biology 2023-01-10 Christine Ahrends , Diego Vidaurre

A basic model of a dynamical distribution network is considered, modeled as a directed graph with storage variables corresponding to every vertex and flow inputs corresponding to every edge, subject to unknown but constant inflows and…

Optimization and Control · Mathematics 2014-03-24 Jieqiang Wei , Arjan van der Schaft

We consider the directed network (DN) of edge states on the surface of a cylinder of length L and circumference C. By mapping it to a ferromagnetic superspin chain, and using a scaling analysis, we show its equivalence to a one-dimensional…

Mesoscale and Nanoscale Physics · Physics 2009-10-28 Ilya A. Gruzberg , N. Read , Subir Sachdev

We consider the long time asymptotic behavior of a large system of $N$ linear differential equations with random coefficients. We allow for general elliptic correlation structures among the coefficients, thus we substantially generalize our…

Probability · Mathematics 2022-10-18 László Erdős , Torben Krüger , David Renfrew

Directionality is a fundamental feature of network connections. Most structural brain networks are intrinsically directed because of the nature of chemical synapses, which comprise most neuronal connections. Due to limitations of…

Neurons and Cognition · Quantitative Biology 2018-01-19 Penelope Kale , Andrew Zalesky , Leonardo L. Gollo