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Knowledge graph embedding involves learning representations of entities -- the vertices of the graph -- and relations -- the edges of the graph -- such that the resulting representations encode the known factual information represented by…

Machine Learning · Computer Science 2023-03-21 Thomas Gebhart , Jakob Hansen , Paul Schrater

In many domains where data are represented as graphs, learning a similarity metric among graphs is considered a key problem, which can further facilitate various learning tasks, such as classification, clustering, and similarity search.…

Machine Learning · Computer Science 2020-10-06 Guixiang Ma , Nesreen K. Ahmed , Theodore L. Willke , Philip S. Yu

Monadically stable and monadically NIP classes of structures were initially studied in the context of model theory and defined in logical terms. They have recently attracted attention in the area of structural graph theory, as they…

Logic in Computer Science · Computer Science 2023-11-28 Jan Dreier , Nikolas Mählmann , Sebastian Siebertz , Szymon Toruńczyk

The limited penetrable horizontal visibility graph algorithm was recently introduced to map time series in complex networks. We extend this visibility graph and create a directed limited penetrable horizontal visibility graph and an image…

Physics and Society · Physics 2018-05-23 Minggang Wang , Andre L. M. Vilela , Ruijin Du , Longfeng Zhao , Gaogao Dong , Lixin Tian , H. Eugene Stanley

Let $X$ be a simplicial complex with a piecewise linear function $f:X\to\mathbb{R}$. The Reeb graph $Reeb(f,X)$ is the quotient of $X$, where we collapse each connected component of $f^{-1}(t)$ to a single point. Let the nodes of…

Computational Geometry · Computer Science 2013-12-09 Vitaliy Kurlin

This paper introduces ReeSPOT, a novel Reeb graph-based method to model patterns of life in human trajectories (akin to a fingerprint). Human behavior typically follows a pattern of normalcy in day-to-day activities. This is marked by…

Data Structures and Algorithms · Computer Science 2024-10-01 Bowen Zhang , S. Shailja , Chandrakanth Gudavalli , Connor Levenson , Amil Khan , B. S. Manjunath

Intuitively speaking, a bipartite graph is mirror if it can be drawn in the Cartesian plane in such a way that, the vertices of one stable are points in x=0, the vertices of the other stable set are points in x=1, the edges are straight…

Combinatorics · Mathematics 2013-12-13 Susana-Clara López , Francesc-Antoni Muntaner-Batle

We present theory and practice for robust implementations of bivariate Jacobi set and Reeb space algorithms. Robustness is a fundamental topic in computational geometry that deals with the issues of numerical errors and degenerate cases in…

Computational Geometry · Computer Science 2025-10-10 Petar Hristov , Ingrid Hotz , Talha Bin Masood

We prove that, up to homeomorphism, any graph subject to natural necessary conditions on orientation and the cycle rank can be realized as the Reeb graph of a Morse function on a given closed manifold $M$. Along the way, we show that the…

Geometric Topology · Mathematics 2024-03-05 Łukasz Patryk Michalak

Graph convolution (GConv) is a widely used technique that has been demonstrated to be extremely effective for graph learning applications, most notably node categorization. On the other hand, many GConv-based models do not quantify the…

Machine Learning · Computer Science 2022-07-27 Zhiqian Chen , Zonghan Zhang

Sparse graphs and their associated matroids play an important role in rigidity theory, where they capture the combinatorics of generically rigid structures. We define a new family called {\bf graded sparse graphs}, arising from generically…

Combinatorics · Mathematics 2011-11-10 Audrey Lee , Ileana Streinu , Louis Theran

As a pioneering work we construct explicit real algebraic functions which may have both compact and non-compact preimages. The author has obtained explicit real algebraic functions with preimages satisfying some nice conditions. More…

Algebraic Geometry · Mathematics 2023-04-18 Naoki Kitazawa

Graphs are nowadays ubiquitous in the fields of signal processing and machine learning. As a tool used to express relationships between objects, graphs can be deployed to various ends: I) clustering of vertices, II) semi-supervised…

Machine Learning · Computer Science 2020-07-17 Carlos Lassance , Vincent Gripon , Gonzalo Mateos

In recent work, the authors developed a simple method of constructing topological spaces from certain well-behaved partially ordered sets -- those coming from sequences of relations between finite sets. This method associates a given poset…

General Topology · Mathematics 2025-09-11 Adam Bartoš , Tristan Bice , Alessandro Vignati

We introduce a symmetric monoidal $\infty$-category $\mathrm{GrCob}$ of graph cobordisms between spaces, and use the homology of its morphism spaces to define string operations. Precisely, for an $E_\infty$-ring spectrum $R$ and an oriented…

Algebraic Topology · Mathematics 2025-12-11 Andrea Bianchi

The problem of node-similarity in networks has motivated a plethora of such measures between node-pairs, which make use of the underlying graph structure. However, higher-order relations cannot be losslessly captured by mere graphs and…

Social and Information Networks · Computer Science 2021-11-02 Govind Sharma , Paarth Gupta , M. Narasihma Murty

Graphs are commonly used to characterise interactions between objects of interest. Because they are based on a straightforward formalism, they are used in many scientific fields from computer science to historical sciences. In this paper,…

Machine Learning · Statistics 2015-06-24 Pierre Latouche , Fabrice Rossi

This paper brings together three distinct theories with the goal of quantifying shape textures with complex morphologies. Distance fields are central objects in shape representation, while topological data analysis uses algebraic topology…

Algebraic Topology · Mathematics 2023-07-04 Anna Song , Ka Man Yim , Anthea Monod

Graph construction, a fundamental operation in a data processing pipeline, is typically done by multiplying the incidence array representations of a graph, $\mathbf{E}_\mathrm{in}$ and $\mathbf{E}_\mathrm{out}$, to produce an adjacency…

Data Structures and Algorithms · Computer Science 2017-09-19 Hayden Jananthan , Karia Dibert , Jeremy Kepner

We develop a theory of rewriting for structured cospans in order to extend compositional methods for modeling open networks. First, we introduce a category whose objects are structured cospans, and establish conditions under which it is…

Category Theory · Mathematics 2026-04-06 Daniel Cicala