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We propose a modified MSA algorithm on quantum annealers with applications in areas of bioinformatics and genetic sequencing. To understand the human genome, researchers compare extensive sets of these genetic sequences -- or their protein…

Quantum Physics · Physics 2024-03-28 Melody Lee

Complementation of nondeterministic B\"uchi automata (BAs) is an important problem in automata theory with numerous applications in formal verification, such as termination analysis of programs, model checking, or in decision procedures of…

Formal Languages and Automata Theory · Computer Science 2023-01-06 Vojtěch Havlena , Ondřej Lengál , Yong Li , Barbora Šmahlíková , Andrea Turrini

Neural architecture search (NAS) finds high performing networks for a given task. Yet the results of NAS are fairly prosaic; they did not e.g. create a shift from convolutional structures to transformers. This is not least because the…

One-Counter Nets (OCNs) are finite-state automata equipped with a counter that is not allowed to become negative, but does not have zero tests. Their simplicity and close connection to various other models (e.g., VASS, Counter Machines and…

Formal Languages and Automata Theory · Computer Science 2021-12-28 Shaull Almagor , Asaf Yeshurun

In this paper, we give a Nivat-like characterization for weighted alternating automata over commutative semirings (WAFA). To this purpose we prove that weighted alternating can be characterized as the concatenation of weighted finite tree…

Formal Languages and Automata Theory · Computer Science 2021-09-20 Gustav Grabolle

Artificial synthesis of DNA molecules is an essential part of the study of biological mechanisms. The design of a synthetic DNA molecule usually involves many objectives. One of the important objectives is to eliminate short sequence…

Biomolecules · Quantitative Biology 2021-08-13 Zehavit Leibovich , Ilan Gronau

Cornerstones of the Cellular Automaton Interpretation of Quantum Mechanics are its ontological states that evolve by permutations, in this way never creating would-be quantum mechanical superposition states. We review and illustrate this…

Quantum Physics · Physics 2024-11-06 Hans-Thomas Elze

Recurrent Neural Networks (RNNs) have achieved tremendous success in processing sequential data, yet understanding and analyzing their behaviours remains a significant challenge. To this end, many efforts have been made to extract finite…

Computation and Language · Computer Science 2023-06-27 Zeming Wei , Xiyue Zhang , Yihao Zhang , Meng Sun

The combination of non-orthogonal multiple access (NOMA) and intelligent reflecting surface (IRS) is an efficient solution to significantly enhance the energy efficiency of the wireless communication system. In this paper, we focus on a…

Signal Processing · Electrical Eng. & Systems 2020-09-15 Ximing Xie , Fang Fang , Zhiguo Ding

In this paper, we study the weighted difference substitutions from geometrical views. First, we give the geometric meanings of the weighted difference substitutions, and introduce the concept of convergence of the sequence of substitution…

Symbolic Computation · Computer Science 2009-12-30 Xiaorong Hou , Song Xu , Junwei Shao

We consider the problem of minimising the number of states in a multiplicity tree automaton over the field of rational numbers. We give a minimisation algorithm that runs in polynomial time assuming unit-cost arithmetic. We also show that a…

Formal Languages and Automata Theory · Computer Science 2019-03-14 Stefan Kiefer , Ines Marusic , James Worrell

The Poisson compound decision problem is a long-standing problem in statistics, where empirical Bayes methodologies are commonly used to estimate Poisson's means in static or batch domains. In this paper, we study the Poisson compound…

Methodology · Statistics 2025-06-10 Stefano Favaro , Sandra Fortini

We present an SMT-based active learning algorithm for nondeterministic weighted automata (WFAs) as a practical and robust alternative to Hankel/L*-style methods. Our algorithm is parametric in a given semiring and, if it terminates,…

Formal Languages and Automata Theory · Computer Science 2026-05-11 Tiago Ferreira , Kevin Batz , Alexandra Silva

There is a constant need for high-performing and computationally efficient neural network models for image super-resolution: computationally efficient models can be used via low-capacity devices and reduce carbon footprints. One way to…

Computer Vision and Pattern Recognition · Computer Science 2024-01-11 Egor Shvetsov , Dmitry Osin , Alexey Zaytsev , Ivan Koryakovskiy , Valentin Buchnev , Ilya Trofimov , Evgeny Burnaev

Hierarchical uncertainty quantification can reduce the computational cost of stochastic circuit simulation by employing spectral methods at different levels. This paper presents an efficient framework to simulate hierarchically some…

Computational Engineering, Finance, and Science · Computer Science 2016-11-17 Zheng Zhang , Xiu Yang , Ivan V. Oseledets , George Em Karniadakis , Luca Daniel

We consider concurrent systems consisting of a finite but unknown number of components, that are replicated instances of a given set of finite state automata. The components communicate by executing interactions which are simultaneous…

Formal Languages and Automata Theory · Computer Science 2019-02-08 Marius Bozga , Radu Iosif , Joseph Sifakis

The simulation of deterministic pushdown automata defined over a one-letter alphabet by finite state automata is investigated from a descriptional complexity point of view. We show that each unary deterministic pushdown automaton of size s…

Formal Languages and Automata Theory · Computer Science 2009-05-11 Giovanni Pighizzini

Many metainterpreters found in the logic programming literature are nondeterministic in the sense that the selection of program clauses is not determined. Examples are the familiar "demo" and "vanilla" metainterpreters. For some…

Logic in Computer Science · Computer Science 2007-05-23 David A. Rosenblueth

We investigate finite deterministic automata in sets with non-homogeneous atoms: integers with successor. As there are uncount- ably many deterministic finite automata in this setting, we restrict our attention to automata with semilinear…

Logic in Computer Science · Computer Science 2012-10-19 Mikołaj Bojańczyk , Sławomir Lasota

Estimation of the number of superimposed sinusoids in the presence of noise is an important model order selection (MOS) problem in statistical signal processing. In this paper, we propose a new approach to the design of MOS algorithms for…

Signal Processing · Electrical Eng. & Systems 2024-07-04 Aleksandr Kharin