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Phase variation, or stochastic switching between alternative states of gene expression, is common among microbes, and may be important in coping with changing environments. We use a theoretical model to assess whether such switching is a…

Populations and Evolution · Quantitative Biology 2010-04-13 Paolo Visco , Rosalind J. Allen , Satya N. Majumdar , Martin R. Evans

We investigate the contact process on scale-free networks evolving by a stationary dynamics whereby each vertex independently updates its connections with a rate depending on its power. This rate can be slowed down or speeded up by virtue…

Probability · Mathematics 2024-09-18 Emmanuel Jacob , Amitai Linker , Peter Mörters

We consider a continuous time Markov process on $\mathbb{N}_0$ which can be interpreted as generalized alternating birth-death process in a non-autonomous random environment. Depending on the status of the environment the process either…

Probability · Mathematics 2020-05-13 Hans Daduna

Motivated by a general principle governing regulation mechanisms in biological cells, we investigate a general interaction scheme between different populations of particles and specific particles, referred to as agents. Assuming that each…

Probability · Mathematics 2023-10-10 Vincent Fromion , Philippe Robert , Jana Zaherddine

A one dimensional non-equilibrium stochastic model is proposed where each site of the lattice is occupied by a particle, which may be of type A or B. The time evolution of the model occurs through three processes: autocatalytic generation…

Statistical Mechanics · Physics 2007-05-23 Wellington G. Dantas , Armando Ticona , Jurgen F. Stilck

This article is concerned with a version of the contact process with sexual reproduction on a graph with two levels of interactions modeling metapopulations. The population is spatially distributed into patches and offspring are produced in…

Probability · Mathematics 2013-07-26 Nicolas Lanchier

We study a random matrix model for the statistical properties of the purity of a bipartite quantum system at a finite (fictitious) temperature. This enables us to write the generating function for the cumulants, for both balanced and…

Quantum Physics · Physics 2010-01-30 P. Facchi , U. Marzolino , G. Parisi , S. Pascazio , A. Scardicchio

We propose experimentally feasible ways to probe universal features of absorbing phase transitions from two different approaches, both based on numerical validations. On one hand, we numerically study a probability distribution of…

Statistical Mechanics · Physics 2018-12-20 Keiichi Tamai , Masaki Sano

We propose a stochastic model for evolution. Births and deaths of species occur with constant probabilities. Each new species is associated with a fitness sampled from the uniform distribution on [0,1]. Every time there is a death event…

Probability · Mathematics 2010-11-09 Herve Guiol , Fabio P. Machado , Rinaldo B. Schinazi

The contact process is a simple infection spreading model showcasing an out-of-equilibrium phase transition between a macroscopically active and an inactive phase. Such absorbing state phase transitions are often sensitive to the presence…

Statistical Mechanics · Physics 2025-09-22 Leone V. Luzzatto , Juan Felipe Barrera López , István A. Kovács

A conserved generalized zero range process is considered in which two sites interact such that particles hop from the more populated site to the other with a probability $p$. The steady state particle distribution function $P(n)$ is…

Statistical Mechanics · Physics 2016-05-04 Abdul Khaleque , Parongama Sen

Understanding how stochastic and non-linear deterministic processes interact is a major challenge in population dynamics theory. After a short review, we introduce a stochastic individual-centered particle model to describe the evolution in…

Probability · Mathematics 2009-06-29 Regis Ferriere , Viet Chi Tran

A one-dimensional reaction-diffusion model consisting of two species of particles and vacancies on a ring is introduced. The number of particles in one species is conserved while in the other species it can fluctuate because of creation and…

Statistical Mechanics · Physics 2009-11-13 F H Jafarpour , B Ghavami

Ecological communities with many species can be classified into dynamical phases. In systems with all-to-all interactions, a phase where a fixed point is always reached and a dynamically-fluctuating phase have been found. The dynamics when…

Populations and Evolution · Quantitative Biology 2023-08-04 Stav Marcus , Ari M Turner , Guy Bunin

Plant-pollinator associations are often seen as purely mutualistic, while in reality they can be more complex. Indeed they may also display a diverse array of antagonistic interactions, such as competition and victim--exploiter…

Populations and Evolution · Quantitative Biology 2016-07-21 Tomás A. Revilla , Francisco Encinas-Viso

We characterize a transition from normal to ballistic diffusion in a bouncing ball dynamics. The system is composed of a particle, or an ensemble of non-interacting particles, experiencing elastic collisions with a heavy and periodically…

Statistical Mechanics · Physics 2018-04-04 André L. P. Livorati , Tiago Kroetz , Carl P. Dettmann , Iberê L. Caldas , Edson D. Leonel

The presence of one or more species at some spatial locations but not others is a central matter in ecology. This phenomenon is related to ecological pattern formation. Nonlocal interactions can be considered as one of the mechanisms…

Populations and Evolution · Quantitative Biology 2017-12-29 Ozgur Aydogmus

Contact processes (CP's) with particle creation requiring a minimal neighborhood (restrictive or threshold CP's) present a novel sort of discontinuous absorbing transitions, that revealed itself robust under the inclusion of different…

Statistical Mechanics · Physics 2016-03-30 Salete Pianegonda , C. E. Fiore

We introduce a model of epidemics among moving particles on any locally finite graph. At any time, each vertex is empty, occupied by a healthy particle, or occupied by an infected particle. Infected particles recover at rate $1$ and…

Probability · Mathematics 2025-09-04 M. Hilário , D. Ungaretti , D. Valesin , M. E. Vares

This paper studies contact processes on general countable groups. It is shown that any such contact process has a well-defined exponential growth rate, and this quantity is used to study the process. In particular, it is proved that on any…

Probability · Mathematics 2008-08-28 Jan M. Swart