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Traditional theories of sensorimotor learning posit that animals use sensory error signals to find the optimal motor command in the face of Gaussian sensory and motor noise. However, most such theories cannot explain common behavioral…

Neurons and Cognition · Quantitative Biology 2022-06-08 Baohua Zhou , David Hofmann , Itai Pinkoviezky , Samuel J. Sober , Ilya Nemenman

Behavioral sequences of animals are often structured and can be described by probabilistic rules (or "action syntax"). The patterns of vocal elements in birdsong are a prime example. The encoding of such rules in neural circuits is poorly…

Neurons and Cognition · Quantitative Biology 2015-01-27 Yisi Zhang , Jason D. Wittenbach , Dezhe Z. Jin , Alexay Kozhevnikov

Songs of many songbird species consist of variable sequences of a finite number of syllables. A common approach for characterizing the syntax of these complex syllable sequences is to use transition probabilities between the syllables. This…

Neurons and Cognition · Quantitative Biology 2013-08-22 Dezhe Z. Jin , Alexay A. Kozhevnikov

Complex, learned motor behaviors involve the coordination of large-scale neural activity across multiple brain regions, but our understanding of the population-level dynamics within different regions tied to the same behavior remains…

Singing voice synthesis (SVS) has advanced significantly, enabling models to generate vocals with accurate pitch and consistent style. As these capabilities improve, the need for reliable evaluation and optimization becomes increasingly…

Sound · Computer Science 2025-12-03 Xueyan Li , Yuxin Wang , Mengjie Jiang , Qingzi Zhu , Jiang Zhang , Zoey Kim , Yazhe Niu

In nature, animals encounter high dimensional sensory stimuli that have complex statistical and dynamical structure. Attempts to study the neural coding of these natural signals face challenges both in the selection of the signal ensemble…

Biological Physics · Physics 2007-05-23 Brian D. Wright , Kamal Sen , William Bialek , Allison J. Doupe

Complex sequencing rules observed in birdsongs provide an opportunity to investigate the neural mechanism for generating complex sequential behaviors. To relate the findings from studying birdsongs to other sequential behaviors, it is…

Neurons and Cognition · Quantitative Biology 2015-05-20 Kentaro Katahira , Kenta Suzuki , Kazuo Okanoya , Masato Okada

The means by which neuronal activity yields robust behavior is a ubiquitous question in neuroscience. In the songbird, the timing of a highly stereotyped song motif is attributed to the cortical nucleus HVC, and to feedback to HVC from…

Neurons and Cognition · Quantitative Biology 2018-01-22 Eve Armstrong

While biological vision systems rely heavily on feedback connections to iteratively refine perception, most artificial neural networks remain purely feedforward, processing input in a single static pass. In this work, we propose a…

Computer Vision and Pattern Recognition · Computer Science 2025-07-15 David Calhas , Arlindo L. Oliveira

Identifying sequences of syllables within birdsongs is key to tackling a wide array of challenges, including bird individual identification and better understanding of animal communication and sensory-motor learning. Recently, machine…

Sound · Computer Science 2025-09-27 Mélisande Teng , Julien Boussard , David Rolnick , Hugo Larochelle

Studies of motor control have almost universally examined firing rates to investigate how the brain shapes behavior. In principle, however, neurons could encode information through the precise temporal patterning of their spike trains as…

Neurons and Cognition · Quantitative Biology 2014-04-15 Claire Tang , Diala Chehayeb , Kyle Srivastava , Ilya Nemenman , Samuel Sober

A fundamental problem in neuroscience is to understand how sequences of action potentials ("spikes") encode information about sensory signals and motor outputs. Although traditional theories of neural coding assume that information is…

Neurons and Cognition · Quantitative Biology 2022-10-12 Kyle H. Srivastava , Caroline M. Holmes , Michiel Vellema , Andrea Pack , Coen P. H. Elemans , Ilya Nemenman , Samuel J. Sober

The problem of deciphering how low-level patterns (action potentials in the brain, amino acids in a protein, etc.) drive high-level biological features (sensorimotor behavior, enzymatic function) represents the central challenge of…

Quantitative Methods · Quantitative Biology 2019-11-21 Damián G. Hernández , Samuel J. Sober , Ilya Nemenman

Positive feedback and cooperativity in the regulation of gene expression are generally considered to be necessary for obtaining bistable expression states. Recently, a novel mechanism of bistability termed emergent bistability has been…

Quantitative Methods · Quantitative Biology 2012-10-22 Sayantari Ghosh , Subhasis Banerjee , Indrani Bose

Research in bioacoustics, neuroscience, and linguistics often uses birdsong as a proxy to acquire knowledge across diverse areas. This requires audio models to annotate and parse the birdsong. Developing such models requires precise,…

Machine Learning · Computer Science 2026-05-20 Houtan Ghaffari , Lukas Rauch , Paul Devos

Trial-and-error learning requires evaluating variable actions and reinforcing successful variants. In songbirds, vocal exploration is induced by LMAN, the output of a basal ganglia-circuit that also contributes a corrective bias to the…

Neurons and Cognition · Quantitative Biology 2017-03-09 Tiberiu Tesileanu , Bence Ölveczky , Vijay Balasubramanian

We introduce the concept of self-tuned criticality as a general mechanism for signal detection in sensory systems. In the case of hearing, we argue that active amplification of faint sounds is provided by a dynamical system which is…

Biological Physics · Physics 2009-11-06 Sebastien Camalet , Thomas Duke , Frank Julicher , Jacques Prost

Widespread deployment of societal-scale machine learning systems necessitates a thorough understanding of the resulting long-term effects these systems have on their environment, including loss of trustworthiness, bias amplification, and…

Machine Learning · Computer Science 2024-05-07 Andrey Veprikov , Alexander Afanasiev , Anton Khritankov

How natural communication sounds are spatially represented across the inferior colliculus, the main center of convergence for auditory information in the midbrain, is not known. The neural representation of the acoustic stimuli results from…

Neurons and Cognition · Quantitative Biology 2016-07-01 Dominika Lyzwa , Florentin Wörgötter

Practice of a complex motor gesture involves exploration of motor space to attain a better match to target output, but little is known about the neural code for such exploration. Here, we examine spiking in an area of the songbird brain…

Neurons and Cognition · Quantitative Biology 2014-04-03 Stephanie E. Palmer , Mimi H. Kao , Brian D. Wright , Allison J. Doupe
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