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Ontology-based approaches for predicting gene-disease associations include the more classical semantic similarity methods and more recently knowledge graph embeddings. While semantic similarity is typically restricted to hierarchical…

Machine Learning · Computer Science 2021-06-01 Susana Nunes , Rita T. Sousa , Catia Pesquita

This paper delivers a new perspective of thinking and utilizing syntactic n-grams (sn-grams). Sn-grams are a type of non-linear n-grams which have been playing a critical role in many NLP tasks. Introducing sn-grams to comparing document…

Computation and Language · Computer Science 2021-03-10 Fanchao Meng

Sentiment Analysis is the task of classifying documents based on the sentiments expressed in textual form, this can be achieved by using lexical and semantic methods. The purpose of this study is to investigate the use of semantics to…

Computation and Language · Computer Science 2020-09-02 Ukachi Osisiogu

Semi-structured networks (SSNs) merge the structures familiar from additive models with deep neural networks, allowing the modeling of interpretable partial feature effects while capturing higher-order non-linearities at the same time. A…

Machine Learning · Computer Science 2024-10-15 David Rügamer , Bernard X. W. Liew , Zainab Altai , Almond Stöcker

Discovering communities in complex networks means grouping nodes similar to each other, to uncover latent information about them. There are hundreds of different algorithms to solve the community detection task, each with its own…

Social and Information Networks · Computer Science 2019-07-05 Michele Coscia

The paper illustrates the research result of the application of semantic technology to ease the use and reuse of digital contents exposed as Linked Data on the web. It focuses on the specific issue of explorative research for the resource…

Digital Libraries · Computer Science 2011-10-12 Riccardo Albertoni , Monica De Martino

Semantic similarity measures (SSMs) are widely used in biomedical research but remain underutilized in pharmacovigilance. This study evaluates six ontology-based SSMs for clustering MedDRA Preferred Terms (PTs) in drug safety data. Using…

Computation and Language · Computer Science 2025-04-15 Jeffery L Painter , François Haguinet , Gregory E Powell , Andrew Bate

As proteins with similar structures often have similar functions, analysis of protein structures can help predict protein functions and is thus important. We consider the problem of protein structure classification, which computationally…

Machine Learning · Statistics 2019-10-08 Hongyu Guo , Khalique Newaz , Scott Emrich , Tijana Milenkovic , Jun Li

Identifying semantically equivalent sentences is important for many cross-lingual and mono-lingual NLP tasks. Current approaches to semantic equivalence take a loose, sentence-level approach to "equivalence," despite previous evidence that…

Computation and Language · Computer Science 2022-10-07 Shira Wein , Zhuxin Wang , Nathan Schneider

Community structure is common in many real networks, with nodes clustered in groups sharing the same connections patterns. While many community detection methods have been developed for networks with binary edges, few of them are applicable…

Methodology · Statistics 2023-03-13 Andressa Cerqueira , Elizaveta Levina

Online Social Networks have embarked on the importance of connection strength measures which has a broad array of applications such as, analyzing diffusion behaviors, community detection, link predictions, recommender systems. Though there…

Social and Information Networks · Computer Science 2022-12-22 Soumita Das , Anupam Biswas

Comparison and evaluation of graph-based representations of sentence meaning is a challenge because competing representations of the same sentence may have different number of nodes, and it is not obvious which nodes should be compared to…

Computation and Language · Computer Science 2026-03-30 Daniel Zeman , Federica Gamba

Prediction of node and graph labels are prominent network science tasks. Data analyzed in these tasks are sometimes related: entities represented by nodes in a higher-level (higher-scale) network can themselves be modeled as networks at a…

Molecular Networks · Quantitative Biology 2021-05-27 Shawn Gu , Meng Jiang , Pietro Hiram Guzzi , Tijana Milenkovic

Graphs can model networked data by representing them as nodes and their pairwise relationships as edges. Recently, signal processing and neural networks have been extended to process and learn from data on graphs, with achievements in tasks…

Machine Learning · Computer Science 2021-10-07 Maosheng Yang , Elvin Isufi , Geert Leus

Skeleton data is of low dimension. However, there is a trend of using very deep and complicated feedforward neural networks to model the skeleton sequence without considering the complexity in recent year. In this paper, a simple yet…

Computer Vision and Pattern Recognition · Computer Science 2021-11-09 Pengfei Zhang , Cuiling Lan , Wenjun Zeng , Junliang Xing , Jianru Xue , Nanning Zheng

Aiming at the problem that the current general-purpose semantic text similarity calculation methods are difficult to use the semantic information of scientific academic conference data, a semantic similarity calculation algorithm for…

Information Retrieval · Computer Science 2022-03-24 Runyu Yu , Yawen Li , Ang Li

Two well-known databases of semantic relationships between pairs of words used in psycholinguistics, feature-based and association-based, are studied as complex networks. We propose an algorithm to disentangle feature based relationships…

Computation and Language · Computer Science 2008-12-17 J. Borge , A. Arenas

We introduce SketchGNN, a convolutional graph neural network for semantic segmentation and labeling of freehand vector sketches. We treat an input stroke-based sketch as a graph, with nodes representing the sampled points along input…

Computer Vision and Pattern Recognition · Computer Science 2021-03-26 Lumin Yang , Jiajie Zhuang , Hongbo Fu , Xiangzhi Wei , Kun Zhou , Youyi Zheng

The widespread relevance of complex networks is a valuable tool in the analysis of a broad range of systems. There is a demand for tools which enable the extraction of meaningful information and allow the comparison between different…

Physics and Society · Physics 2011-03-30 Kathryn Cooper , Mauricio Barahona

Spatial Social Networks (SSN) build on the node and edge structure used in Social Network Analysis (SNA) by incorporating spatial information. Thus, SSNs include both topological and spatial data. The geographic embedding of the nodes makes…

Social and Information Networks · Computer Science 2021-01-05 Dipto Sarkar , Piyush Yadav