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It is well recognised that animal and plant pathogens form complex ecological communities of interacting organisms within their hosts. Although community ecology approaches have been applied to determine pathogen interactions at the…

Despite the enormous relevance of zoonotic infections to world- wide public health, and despite much effort in modeling individual zoonoses, a fundamental understanding of the disease dynamics and the nature of outbreaks arising in such…

Populations and Evolution · Quantitative Biology 2013-07-18 Sarabjeet Singh , David J. Schneider , Christopher R. Myers

Competition and collaboration are at the heart of multi-agent probabilistic spreading processes. The battle on public opinion and competitive marketing campaigns are typical examples of the former, while the joint spread of multiple…

Physics and Society · Physics 2021-03-17 Hanlin Sun , David Saad , Andrey Y. Lokhov

Network ecology is a rising field of quantitative biology representing ecosystems as complex networks. A suitable example is parasite spreading: several parasites may be transmitted among their hosts through different mechanisms, each one…

Quantitative Methods · Quantitative Biology 2016-09-12 Massimo Stella , Cecilia S. Andreazzi , Sanja Selakovic , Alireza Goudarzi , Alberto Antonioni

The spread of infectious diseases is often influenced by human mobility across different geographical regions. Although numerous studies have investigated how diseases like SARS and COVID-19 spread from China to various global locations,…

Social and Information Networks · Computer Science 2025-05-22 Md. Arquam , Suchi Kumari , Utkarsh Tiwari , Mohammad Al-saffar

Epidemiological dynamics are affected by the spatial and demographic structure of the host population. Households and neighbourhoods are known to be important groupings but little is known about the epidemiological interplay between them.…

Populations and Evolution · Quantitative Biology 2024-12-12 Abby Barlow , Ben Adams , Sarah Penington

This article is dedicated to the study and comparison of two chemostat-like competition models in a heterogeneous environment. The first model is a probabilistic model where we build a PDMP simulating the effect of the temporal…

Dynamical Systems · Mathematics 2018-06-29 Sten Madec , G Lagasquie

Infectious pathogens often propagate by superspreading, which focusses onward transmission on disproportionately few infected individuals. At the same time, infector-infectee pairs tend to have more similar transmission potentials than…

Populations and Evolution · Quantitative Biology 2025-09-22 Noah Silva de Leonardi , Benjamin D. Dalziel

In the studies of dynamics of pathogens and their interactions with a host immune system, an important role is played by the structure of antigenic variants associated with a pathogen. Using the example of a model of antigenic variation in…

Chaotic Dynamics · Physics 2013-02-22 K. B. Blyuss

We investigate the Susceptible-Infectious-Recovered contagion dynamics in a system of self-propelled particles with polar alignment. Using agent-based simulations, we analyze the outbreak process for different combinations of the spatial…

Adaptation and Self-Organizing Systems · Physics 2021-06-16 Yinong Zhao , Cristián Huepe , Pawel Romanczuk

We study numerically domain growth and interface fluctuations in one- and two-dimensional lattice systems composed of four species that interact in a cyclic way. Particle mobility is implemented through exchanges of particles located on…

Statistical Mechanics · Physics 2015-06-05 Ahmed Roman , David Konrad , Michel Pleimling

Understanding the spread of any disease is a highly complex and interdisciplinary exercise as biological, social, geographic, economic, and medical factors may shape the way a disease moves through a population and options for its eventual…

Populations and Evolution · Quantitative Biology 2016-12-14 Aristides Moustakas

Disease outbreaks, such as those of Severe Acute Respiratory Syndrome in 2003 and the 2009 pandemic A(H1N1) influenza, have highlighted the potential for airborne transmission in indoor environments. Respirable pathogen-carrying droplets…

Physics and Society · Physics 2012-01-10 M. Robinson , N. I. Stilianakis , Y. Drossinos

A biological competition model where the individuals of the same species perform a two-dimensional Markovian continuous-time random walk and undergo reproduction and death is studied. The competition is introduced through the assumption…

Biological Physics · Physics 2011-08-31 E. Heinsalu , E. Hernandez-Garcia , C. Lopez

Understanding interactions between the spread of multiple pathogens during an epidemic is crucial to assessing the severity of infections in human communities. In this paper, we introduce two new Multiplex Bi-Virus Reaction-Diffusion models…

Physics and Society · Physics 2025-08-22 Alyssa Yu , Laura P. Schaposnik

Behavioral adoptions are influenced by peers in different ways. While some individuals may change after a single incoming influence, others need multiple cumulated attempts. These two mechanism, known as the simple and the complex…

Physics and Society · Physics 2024-12-02 Elsa Andres , Romualdo Pastor-Satorras , Michele Starnini , Márton Karsai

Epidemic spreading of infectious diseases is ubiquitous and has often considerable impact on public health and economic wealth. The large variability in spatio-temporal patterns of epidemics prohibits simple interventions and demands for a…

Populations and Evolution · Quantitative Biology 2010-11-25 Christel Kamp

Human mobility forms the backbone of contact patterns through which infectious diseases propagate, fundamentally shaping the spatio-temporal dynamics of epidemics and pandemics. While traditional models are often based on the assumption…

The emergence or adaptation of pathogens may lead to epidemics, highlighting the need for a thorough understanding of pathogen evolution. The tradeoff hypothesis suggests that virulence evolves to reach an optimal transmission intensity…

Populations and Evolution · Quantitative Biology 2024-12-09 Daniel A. M. Villela

The dynamics of infectious diseases propagating in populations depends both on human interaction patterns, the contagion process and the pathogenesis within hosts. The immune system follows a circadian rhythm and, consequently, the chance…

Populations and Evolution · Quantitative Biology 2020-07-01 Zhanwei Du , Petter Holme
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