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Rapidly mutating pathogens may be able to persist in the population and reach an endemic equilibrium by escaping hosts' acquired immunity. For such diseases, multiple biological, environmental and population-level mechanisms determine the…

Physics and Society · Physics 2019-02-07 Alberto Aleta , Andreia N. S. Hisi , Sandro Meloni , Chiara Poletto , Vittoria Colizza , Yamir Moreno

Host-parasitoid population dynamics is often probed using a semi-discrete/hybrid modeling framework. Here, the update functions in the discrete-time model connecting year-to-year changes in the population densities are obtained by solving…

Populations and Evolution · Quantitative Biology 2020-01-01 Brooks Emerick , Abhyudai Singh

Geographic isolation is a central mechanism of speciation, but perfect isolation of populations is rare. Although speciation can be hindered if gene flow is large, intermediate levels of migration can enhance speciation by introducing…

Researchers puzzle over questions as to how rare species survive extinction, and why a significant proportion of microbial taxa are dormant. Computational simulation modeling by a genetic algorithm provides some answers. First, a…

Populations and Evolution · Quantitative Biology 2025-07-01 Sasanka Sekhar Chanda

Bacteria evolve in volatile environments and complex spatial structures. Migration, fluctuations and environmental variability therefore have a significant impact on the evolution of microbial populations. Here, we consider a class of…

Populations and Evolution · Quantitative Biology 2025-11-24 Matthew Asker , Mohamed Swailem , Uwe C. Täuber , Mauro Mobilia

Dispersal of species to find a more favorable habitat is important in population dynamics. Dispersal rates evolve in response to the relative success of different dispersal strategies. In a simplified deterministic treatment (J. Dockery, V.…

Populations and Evolution · Quantitative Biology 2009-07-28 David A. Kessler , Leonard M. Sander

Population dynamics is constrained by the environment, which needs to obey certain conditions to support population growth. We consider a standard model for the evolution of a single species population density, that includes reproduction,…

Populations and Evolution · Quantitative Biology 2016-10-18 E. H. Colombo , C. Anteneodo

We investigate the evolutionary rescue of a microbial population in a gradually deteriorating environment, through a combination of analytical calculations and stochastic simulations. We consider a population destined for extinction in the…

Populations and Evolution · Quantitative Biology 2020-12-17 Loïc Marrec , Anne-Florence Bitbol

The question of whether a population will persist or go extinct is of key interest throughout ecology and biology. Various mathematical techniques allow us to generate knowledge regarding individual behaviour, which can be analysed to…

Populations and Evolution · Quantitative Biology 2021-04-28 Stuart T. Johnston , Matthew J. Simpson , Edmund J. Crampin

In recent years the spread of the ectoparasitic mite Varroa destructor has become the most serious threat to worldwide apiculture. In the model presented here we extend the bee population dynamics with mite viral epidemiology examined in an…

Populations and Evolution · Quantitative Biology 2016-09-15 Sara Bernardi , Ezio Venturino

We introduce a generalized version of the frog model to describe the invasion of a parasite population in a spatially structured immobile host population with host immunity on the integer line. Parasites move according to simple symmetric…

Probability · Mathematics 2025-02-17 Sascha Franck , Cornelia Pokalyuk

As a result of climate change, many populations have to modify their range to follow the suitable areas - their "climate envelope" - often risking extinction. During this migration process, they may face absolute boundaries to dispersal,…

Analysis of PDEs · Mathematics 2009-07-07 Lionel Roques , Alain Roques , Henri Berestycki , André Kretzschmar

Many types of bacteria can survive under stress by switching stochastically between two different phenotypes: the "normals" who multiply fast, but are vulnerable to stress, and the "persisters" who hardly multiply, but are resilient to…

Populations and Evolution · Quantitative Biology 2011-11-10 Ingo Lohmar , Baruch Meerson

A colony of the queenless ant species, \emph{Pristomyrmex punctatus}, can broadly be seen as consisting of small-body sized worker ants and relatively larger body-sized cheater ants. Hence, in the presence of inter-colony migration, a set…

Populations and Evolution · Quantitative Biology 2026-03-03 Joy Das Bairagya , Sagar Chakraborty

Ecological systems comprise an astonishing diversity of species that cooperate or compete with each other forming complex mutual dependencies. The minimum requirements to maintain a large species diversity on long time scales are in general…

Populations and Evolution · Quantitative Biology 2012-09-10 Joachim Mathiesen , Namiko Mitarai , Kim Sneppen , Ala Trusina

We investigate invasions from a biological reservoir to an initially empty, heterogeneous habitat in the presence of advection. The habitat consists of a periodic alternation of favorable and unfavorable patches. In the latter the…

Populations and Evolution · Quantitative Biology 2012-02-27 Davide Vergni , Sandro Iannaccone , Stefano Berti , Massimo Cencini

Interactions in ecological communities are inherently nonlinear and can lead to complex population dynamics including irregular fluctuations induced by chaos. Chaotic population dynamics can exhibit violent oscillations with extremely small…

Populations and Evolution · Quantitative Biology 2007-08-29 Frank M. Hilker , Frank H. Westerhoff

A classical view of speciation is that reproductive isolation arises as a by-product of genetic divergence. Here, individual-based simulations are used to evaluate whether the mechanisms implied by this view may result in rapid speciation…

adap-org · Physics 2007-05-23 Sergey Gavrilets , Hai Li , Michael D. Vose

We study supercritical branching processes under the influence of an i.i.d. emigration component. We provide conditions, under which the lifetime of the process is finite respectively has a finite expectation. A new version of the…

Probability · Mathematics 2020-08-13 Georg Braun

We study a model of growing population that competes for resources. At each time step, all existing particles reproduce and the offspring randomly move to neighboring sites. Then at any site with more than one offspring, the particles are…

Probability · Mathematics 2015-10-26 Idan Perl , Arnab Sen , Ariel Yadin