Related papers: Computing Covers Using Prefix Tables
The Cover Suffix Tree (CST) of a string $T$ is the suffix tree of $T$ with additional explicit nodes corresponding to halves of square substrings of $T$. In the CST an explicit node corresponding to a substring $C$ of $T$ is annotated with…
We study the classic set cover problem from the perspective of sub-linear algorithms. Given access to a collection of $m$ sets over $n$ elements in the query model, we show that sub-linear algorithms derived from existing techniques have…
Computing the permanent of a non-negative matrix is a computationally challenging, \#P-complete problem with wide-ranging applications. We introduce a novel permanental analogue of Schur's determinant formula, leveraging a newly defined…
A $\lambda$-cover of a string $S$ is a set of strings $\{C_i\}_1^\lambda$ such that every index in $S$ is contained in an occurrence of at least one string $C_i$. The existence of a $1$-cover defines a well-known class of quasi-periodic…
While graphs and abstract data structures can be large and complex, practical instances are often regular or highly structured. If the instance has sufficient structure, we might hope to compress the object into a more succinct…
The longest common prefix (LCP) array is a versatile auxiliary data structure in indexed string matching. It can be used to speed up searching using the suffix array (SA) and provides an implicit representation of the topology of an…
A $t$-covering array with entries from the alphabet ${\cal Q}=\{0,1,\ldots,q-1\}$ is a $k\times n$ stack, so that for any choice of $t$ (typically non-consecutive) columns, each of the $q^{t}$ possible $t$-letter words over ${\cal Q}$…
A $k$-matching cover of a graph $G$ is a union of $k$ matchings of $G$ which covers $V(G)$. A matching cover of $G$ is optimal if it consists of the fewest matchings of $G$. In this paper, we present an algorithm for finding an optimal…
Given a string $S$ of length $n$, the classic string indexing problem is to preprocess $S$ into a compact data structure that supports efficient subsequent pattern queries. In the \emph{deterministic} variant the goal is to solve the string…
In CPM 2017, Amir et al. introduce a problem, named \emph{approximate string cover} (\textbf{ACP}), motivated by many aplications including coding and automata theory, formal language theory, combinatorics and molecular biology. A…
We present a 1.8334-approximation algorithm for Vertex Cover on string graphs given with a representation, which takes polynomial time in the size of the representation; the exact approximation factor is $11/6$. Recently, the barrier of 2…
We study the complexity of identifying the integer feasibility of reverse convex sets. We present various settings where the complexity can be either NP-Hard or efficiently solvable when the dimension is fixed. Of particular interest is the…
In this paper, we showcase the process of using an automated conjecturing program called \emph{TxGraffiti} written and maintained by the second author. We begin by proving a conjecture formulated by \emph{TxGraffiti} that for a claw-free…
Eternal vertex cover problem is a variant of the classical vertex cover problem modeled as a two player attacker-defender game. Computing eternal vertex cover number of graphs is known to be NP-hard in general and the complexity status of…
An $(n,R)$-covering sequence is a cyclic sequence whose consecutive $n$-tuples form a code of length $n$ and covering radius $R$. Using several construction methods improvements of the upper bounds on the length of such sequences for $n…
Recently, Cenzato et al.\ proposed a new text index, called the \emph{suffixient array}, which is a subset of the suffix array and supports locating a single pattern occurrence or finding its maximal exact matches (MEMs), assuming random…
In this paper, we consider the problem of covering a plane region with unit discs. We present an improved upper bound and the first nontrivial lower bound on the number of discs needed for such a covering, depending on the area and…
Strings in the real world are often encoded with some level of uncertainty. In the character-level uncertainty model, an uncertain string $X$ of length $n$ on an alphabet $\Sigma$ is a sequence of $n$ probability distributions over…
Let $\Gamma$ be a quiver on n vertices $v_1, v_2, ..., v_n$ with $g_{ij}$ edges between $v_i$ and $v_j$, and let $\alpha \in \N^n$. Hua gave a formula for $A_{\Gamma}(\alpha, q)$, the number of isomorphism classes of absolutely…
In a \emph{weighted sequence}, for every position of the sequence and every letter of the alphabet a probability of occurrence of this letter at this position is specified. Weighted sequences are commonly used to represent imprecise or…