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The Goulden$\unicode{x2013}$Jackson cluster method, adapted to permutations by Elizalde and Noy, reduces the problem of counting permutations by occurrences of a prescribed consecutive pattern to that of counting clusters, which are special…

Combinatorics · Mathematics 2023-05-19 Sergi Elizalde , Justin M. Troyka , Yan Zhuang

We present here two irreversible Markov chain Monte Carlo algorithms for general discrete state systems, one of the algorithms is based on the random-scan Gibbs sampler for discrete states and the other on its improved version, the…

Statistical Mechanics · Physics 2020-05-08 Fahim Faizi , George Deligiannidis , Edina Rosta

Rooted acyclic graphs appear naturally when the phylogenetic relationship of a set $X$ of taxa involves not only speciations but also recombination, horizontal transfer, or hybridization, that cannot be captured by trees. A variety of…

Populations and Evolution · Quantitative Biology 2022-04-29 Marc Hellmuth , David Schaller , Peter F. Stadler

We recover the Tutte polynomial of a matroid, up to change of coordinates, from an Ehrhart-style polynomial counting lattice points in the Minkowski sum of its base polytope and scalings of simplices. Our polynomial has coefficients of…

Combinatorics · Mathematics 2018-02-28 Amanda Cameron , Alex Fink

We define the interpolative fusion $T^*_\cup$ of a family $(T_i)_{i \in I}$ of first-order theories over a common reduct $T_\cap$, a notion that generalizes many examples of random or generic structures in the model-theoretic literature.…

Logic · Mathematics 2021-11-04 Alex Kruckman , Minh Chieu Tran , Erik Walsberg

Comparing clusterings is central to evaluating unsupervised models, yet the many existing similarity measures can produce widely divergent, sometimes contradictory, evaluations. Clustering similarity measures are typically organized into…

Machine Learning · Statistics 2025-11-06 Alexander J. Gates

An exponential-time exact algorithm is provided for the task of clustering n items of data into k clusters. Instead of seeking one partition, posterior probabilities are computed for summary statistics: the number of clusters, and pairwise…

Computation · Statistics 2013-10-04 Jukka Kohonen , Jukka Corander

Consider a central problem in randomized approximation schemes that use a Monte Carlo approach. Given a sequence of independent, identically distributed random variables $X_1,X_2,\ldots$ with mean $\mu$ and standard deviation at most $c…

Statistics Theory · Mathematics 2014-11-18 Mark Huber

In this article, we study a model of random permutations, which we call random standardized permutations, based on a sequence of i.i.d. random variables. This model generalizes others, such as the riffle-shuffle and the major-index-biased…

Probability · Mathematics 2026-03-26 Aurélien Guerder

The Tutte polynomial is the most general invariant of matroids and graphs that can be computed recursively by deleting and contracting edges. We generalize this invariant to any class of combinatorial objects with deletion and contraction…

Combinatorics · Mathematics 2019-02-04 Clément Dupont , Alex Fink , Luca Moci

Recurrence is a fundamental property of dynamical systems, which can be exploited to characterise the system's behaviour in phase space. A powerful tool for their visualisation and analysis called recurrence plot was introduced in the late…

Chaotic Dynamics · Physics 2025-01-27 Norbert Marwan , Maria Carmen Romano , Marco Thiel , Jürgen Kurths

Herein, we propose a site random cluster model by introducing an additional cluster weight in the partition function of the traditional site percolation. To simulate the model on a square lattice, we combine the color-assignation and the…

Statistical Mechanics · Physics 2015-08-26 Songsong Wang , Yuan Yang , Wanzhou Zhang , Chengxiang Ding

The multiplicity Tutte polynomial, which includes the arithmetic Tutte polynomial, is a generalization of the classical Tutte polynomial of matroids. In this paper, we obtain an expression of the general coefficient and the expressions of…

Combinatorics · Mathematics 2024-02-06 Xian'an Jin , Tianlong Ma , Weiling Yang

Complex continuous or mixed joint distributions (e.g., P(Y | z_1, z_2, ..., z_N)) generally lack closed-form solutions, often necessitating approximations such as MCMC. This paper proposes Indeterminate Probability Theory (IPT), which makes…

Machine Learning · Computer Science 2025-06-24 Tao Yang , Chuang Liu , Xiaofeng Ma , Weijia Lu , Ning Wu , Bingyang Li , Zhifei Yang , Peng Liu , Lin Sun , Xiaodong Zhang , Can Zhang

We provide a self-contained introduction to random matrices. While some applications are mentioned, our main emphasis is on three different approaches to random matrix models: the Coulomb gas method and its interpretation in terms of…

Mathematical Physics · Physics 2018-07-06 Bertrand Eynard , Taro Kimura , Sylvain Ribault

Using the random-cluster representation of the $q$-state Potts models we consider the pooling of data from cluster-update Monte Carlo simulations for different thermal couplings $K$ and number of states per spin $q$. Proper combination of…

Statistical Mechanics · Physics 2009-11-07 Martin Weigel , Wolfhard Janke , Chin-Kun Hu

Extending the rigorous presentation of the classical umbral calculus given by Rota and Taylor in 1994, the so-called partition polynomials are interpreted with the aim to point out the umbral nature of the Poisson random variables. Among…

Probability · Mathematics 2007-05-23 E. Di Nardo , D. Senato

This paper surveys a comprehensive, although not exhaustive, sampling of graph polynomials with the goal of providing a brief overview of a variety of techniques defining a graph polynomial and then for decoding the combinatorial…

Combinatorics · Mathematics 2008-07-01 Joanna Ellis-Monaghan , Criel Merino

In classical random matrix theory the Gaussian and chiral Gaussian random matrix models with a source are realized as shifted mean Gaussian, and chiral Gaussian, random matrices with real $(\beta = 1)$, complex ($\beta = 2)$ and real…

Probability · Mathematics 2015-06-16 Peter J. Forrester

Clustering and dependence are common in trials. For example, in some cluster randomized trials (CRTs), pre-existing clusters are enrolled, randomized, and serve as the basis of intervention delivery. Such CRTs are "fully clustered":…

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