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There is more and more evidence that machine learning can be successfully applied in materials science and related fields. However, datasets in these fields are often quite small ($\ll1000$ samples). It makes the most advanced machine…

Computational Physics · Physics 2022-02-25 Guillaume Lambard , Ekaterina Gracheva

MSS is an algorithm to determine the radii and positions of spheres that fill a given volume. In the context of granular materials, MSS is a particle generator for DEM simulations of complex-shaped particles. Here, each particle of a given…

Soft Condensed Matter · Physics 2026-03-09 Felix Buchele , Thorsten Pöschel , Patric Mueller

Releasing capsules are widely employed in biomedical applications as smart carriers of therapeutic agents, including drugs and bioactive compounds. Such delivery vehicles typically consist of a loaded core, enclosed by one or multiple…

Strong-lensing images provide a wealth of information both about the magnified source and about the dark matter distribution in the lens. Precision analyses of these images can be used to constrain the nature of dark matter. However, this…

Instrumentation and Methods for Astrophysics · Physics 2022-05-25 Konstantin Karchev , Adam Coogan , Christoph Weniger

Gaussian time-series models are often specified through their spectral density. Such models present several computational challenges, in particular because of the non-sparse nature of the covariance matrix. We derive a fast approximation of…

Computation · Statistics 2012-11-20 Nicolas Chopin , Judith Rousseau , Brunero Liseo

Simulation has become the evaluation method of choice for many areas of distributing computing research. However, most existing simulation packages have several limitations on the size and complexity of the system being modeled. Fine…

Distributed, Parallel, and Cluster Computing · Computer Science 2011-07-01 Dobre Ciprian , Cristea Valentin , Iosif C. Legrand

Atomic-level simulations are widely used to study biomolecules and their dynamics. A common goal in such studies is to compare simulations of a molecular system under several conditions -- for example, with various mutations or bound…

Biomolecules · Quantitative Biology 2025-01-07 Martin Vögele , Neil J. Thomson , Sang T. Truong , Jasper McAvity , Ulrich Zachariae , Ron O. Dror

The increased availability and brilliance of new X-ray facilities have in the recent years opened up the possibility to characterize the motion of dispersed nanoparticles in various microfluidic applications. One of these applications is…

Soft Condensed Matter · Physics 2018-04-24 Tomas Rosén , Christophe Brouzet , Stephan V. Roth , Fredrik Lundell , L. Daniel Söderberg

Inelastic x-ray scattering (IXS) now a widely used technique for studying the dynamics of electrons in condensed matter. We previously posed a solution to the phase problem for IXS [P. Abbamonte, et. al., Phys. Rev. Lett. {\bf 92}, 237401…

Strongly Correlated Electrons · Physics 2013-05-29 P. Abbamonte , J. P. Reed , Y. I. Joe , Yu Gan , D. Casa

Mixture models, such as Gaussian mixture models, are widely used in machine learning to represent complex data distributions. A key challenge, especially in high-dimensional settings, is to determine the mixture order and estimate the…

Optimization and Control · Mathematics 2025-09-30 Srećko Đurašinović , Jean-Bernard Lasserre , Victor Magron

A single and self-contained method for determining the crystallite-size distribution and shape from experimental x-ray line profile data is presented. We have shown that the crystallite-size distribution can be determined without assuming a…

Data Analysis, Statistics and Probability · Physics 2007-05-23 N. Armstrong , W. Kalceff , J. P. Cline , J. Bonevich

The Sparse Grids Matlab Kit provides a Matlab implementation of sparse grids, and can be used for approximating high-dimensional functions and, in particular, for surrogate-model-based uncertainty quantification. It is lightweight,…

Mathematical Software · Computer Science 2023-10-11 Chiara Piazzola , Lorenzo Tamellini

Machine learning (ML) techniques, in particular supervised regression algorithms, are a promising new way to use multiple observables to predict a cluster's mass or other key features. To investigate this approach we use the \textsc{MACSIS}…

Cosmology and Nongalactic Astrophysics · Physics 2019-01-16 Thomas J. Armitage , Scott T. Kay , David J. Barnes

Miniature atomic beams can provide new functionalities for atom based sensing instruments such as atomic clocks and interferometers. We recently demonstrated a planar silicon device for generating well-collimated thermal atomic beams [Nat…

Atomic Physics · Physics 2020-07-01 Chao Li , Bochao Wei , Xiao Chai , Jeremy Yang , Anosh Daruwalla , Farrokh Ayazi , C. Raman

Several acquisitions of X-ray microtomography have been performed on a beads packing while it compacts under vertical vibrations. An image analysis allows to study the evolution of the packing structure during its progressive densification.…

Soft Condensed Matter · Physics 2009-11-10 Patrick Richard , Pierre Philippe , Fabrice Barbe , Stéphane Bourlès , Xavier Thibault , Daniel Bideau

Gaussian process regression is widely used because of its ability to provide well-calibrated uncertainty estimates and handle small or sparse datasets. However, it struggles with high-dimensional data. One possible way to scale this…

Machine Learning · Statistics 2024-02-02 Bernardo Fichera , Viacheslav Borovitskiy , Andreas Krause , Aude Billard

We introduce an \verb|R| package, called \verb|MPS|, for computing the probability density function, computing the cumulative distribution function, computing the quantile function, simulating random variables, and estimating the parameters…

Computation · Statistics 2018-09-11 Mahdi Teimouri

Direct-sequence spread-spectrum (DSSS) is commonly used to mitigate the effect of jamming and to operate under an adversary receiver's thermal noise floor in order to avoid signal detection. Unfortunately, the discrete nature and unique…

Signal Processing · Electrical Eng. & Systems 2018-07-20 Ismail Shakeel

Shape estimates that quantify the halo anisotropic mass distribution are valuable parameters that provide information on their assembly process and evolution. Measurements of the mean shapes for a sample of cluster-sized halos can be used…