English
Related papers

Related papers: Close Contact Fluctuations: Time of Contact

200 papers

The article analyzes the contribution of stochastic thermal fluctuations in the attachment times of the immature T-cell receptor TCR: peptide-major-histocompatibility-complex pMHC immunological synapse bond. The key question addressed here…

Subcellular Processes · Quantitative Biology 2016-08-17 Daniel R. Bush , Amit K. Chattopadhyay

Adhesion between a T cell and an antigen presenting cell is achieved by TCR-pMHC and LFA1-ICAM1 protein complexes. These segregate to form a special pattern, known as the immunological synapse (IS), consisting of a central quasi-circular…

Soft Condensed Matter · Physics 2017-10-06 Nadiv Dharan , Oded Farago

We analyse the size and density of thermally induced regions of close contact in cell:cell contact interfaces within a harmonic potential approximation, estimating these regions to be below one-tenth of a micron across. Our calculations…

Biological Physics · Physics 2013-04-01 Amit K Chattopadhyay , Nigel J Burroughs

The immunological synapse is a patterned collection of different types of receptors and ligands that forms in the intercellular junction between T Cells and antigen presenting cells (APCs) during recognition. The synapse is implicated in…

Soft Condensed Matter · Physics 2009-11-10 Subhadip Raychaudhuri , Arup K. Chakraborty , Mehran Kardar

Upon contact with antigen presenting cells (APCs) cytotoxic T lymphocytes (T cells) establish a highly organized contact zone denoted as immunological synapse (IS). The formation of the IS implies relocation of the microtubule organizing…

Biological Physics · Physics 2019-05-30 Apurba Sarkar , Heiko Rieger , Raja Paul

The cellular basis for the adaptive immune response during antigen recognition relies on a specialized protein interface known as the immunological synapse (IS). Understanding the biophysical basis for protein patterning by deciphering the…

Biological Physics · Physics 2016-02-17 Andreas Carlson , L. Mahadevan

The T cell arm of the adaptive immune system provides the host protection against unknown pathogens by discriminating between host and foreign material. This discriminatory capability is achieved by the creation of a repertoire of cells…

Biological Physics · Physics 2022-01-03 Kevin Ng Chau , Jason T. George , José N. Onuchic , Xingcheng Lin , Herbert Levine

We illuminate the many-body effects underlying the structure, formation, and dissolution of cellular adhesion domains in the presence and absence of forces. We consider mixed Glauber-Kawasaki dynamics of a two-dimensional model of…

Statistical Mechanics · Physics 2021-10-04 Kristian Blom , Aljaž Godec

The adhesion zone of immune cells, the 'immunological synapse', exhibits characteristic domains of receptor-ligand complexes. The domain formation is likely caused by a length difference of the receptor-ligand complexes, and has been…

Soft Condensed Matter · Physics 2015-05-19 Bartosz Rozycki , Reinhard Lipowsky , Thomas R. Weikl

T cells form intriguing patterns during adhesion to antigen-presenting cells. The patterns at the cell-cell contact zone are composed of two types of domains, which either contain short TCR/MHCp receptor-ligand complexes or the longer…

Subcellular Processes · Quantitative Biology 2009-11-10 Thomas R. Weikl , Reinhard Lipowsky

We study magnitudes and temperature dependences of the electron-electron and electron-phonon interaction times which play the dominant role in the formation and relaxation of photon induced hotspot in two dimensional amorphous WSi films.…

We argue that a crucial determinant of the acceptance dependence of fluctuation measures in heavy-ion collisions is the range of correlations in the momentum space, e.g., in rapidity, $\Delta y_{\rm corr}$. The value of $\Delta y_{\rm…

Nuclear Theory · Physics 2016-04-06 Bo Ling , Mikhail A. Stephanov

Cell-cell adhesion is established by specific binding of receptor and ligand proteins. The adhesion bonds attract each other and often aggregate into large clusters that are central to many biological processes. One possible origin of…

Soft Condensed Matter · Physics 2016-07-07 Nadiv Dharan , Oded Farago

Inter-cell interference coordination (ICIC) and intra-cell diversity (ICD) play important roles in improving cellular downlink coverage. Modeling cellular base stations (BSs) as a homogeneous Poisson point process (PPP), this paper provides…

Information Theory · Computer Science 2015-03-17 Xinchen Zhang , Martin Haenggi

We study a highly supercooled two-dimensional fluid mixture via molecular dynamics simulation. We follow bond breakage events among particle pairs, which occur on the scale of the $\alpha$ relaxation time $\tau_{\alpha}$. Large scale…

Soft Condensed Matter · Physics 2015-06-25 Ryoichi Yamamoto , Akira Onuki

Time-dependent properties of the speckled intensity patterns created by scattering coherent radiation from materials undergoing spinodal decomposition are investigated by numerical integration of the Cahn-Hilliard-Cook equation. For binary…

Statistical Mechanics · Physics 2009-10-31 Gregory Brown , Per Arne Rikvold , Mark Sutton , Martin Grant

Cooperative behaviors near the disorder-induced critical point in a random field Ising model are numerically investigated by analyzing time-dependent magnetization in ordering processes from a special initial condition. We find that the…

Statistical Mechanics · Physics 2025-01-06 Hiroki Ohta , Shin-ichi Sasa

Membranes containing a wide variety of ternary mixtures of high chain-melting temperature lipids, low chain-melting temperature lipids, and cholesterol undergo lateral phase separartion into coexisting liquid phases at a miscibility…

Monte Carlo simulations of protein folding show the emergence of a strong correlation between the relative contact order parameter, CO, and the folding time, t, of two-state folding proteins for longer chains with number of amino acids,…

Soft Condensed Matter · Physics 2007-05-23 P. F. N. Faisca , R. C. Ball

Multispeckle x-ray photon correlation spectroscopy was employed to characterize the slow dynamics of a colloidal suspension formed by highly-charged, nanometer-sized disks. At scattering wave vectors $q$ corresponding to interparticle…

‹ Prev 1 2 3 10 Next ›