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Computational topology provides a tool, persistent homology, to extract quantitative descriptors from structured objects (images, graphs, point clouds, etc). These descriptors can then be involved in optimization problems, typically as a…

Computational Geometry · Computer Science 2026-03-27 Mathieu Carriere , Yuichi Ike , Théo Lacombe , Naoki Nishikawa

We show that subsets of interacting oscillators may synchronize in different ways within a single network. This diversity of synchronization patterns is promoted by increasing the heterogeneous distribution of coupling weights and/or…

Pattern Formation and Solitons · Physics 2017-04-05 Daniel Malagarriga , Alessandro E. P. Villa , Jordi García-Ojalvo , Antonio J. Pons

The topology of social networks can be understood as being inherently dynamic, with edges having a distinct position in time. Most characterizations of dynamic networks discretize time by converting temporal information into a sequence of…

Data Analysis, Statistics and Probability · Physics 2012-12-03 Aaron Clauset , Nathan Eagle

The structure representation of data distribution plays an important role in understanding the underlying mechanism of generating data. In this paper, we propose nearest prime simplicial complex approaches (NSC) by utilizing persistent…

Machine Learning · Computer Science 2015-03-19 Junping Zhang , Ziyu Xie , Stan Z. Li

Simplicial homology is a tool that provides a mathematical way to compute the connectivity and the coverage of a cellular network without any node location information. In this article, we use simplicial homology in order to not only…

Networking and Internet Architecture · Computer Science 2018-07-30 Anaïs Vergne , Laurent Decreusefond , Philippe Martins

Temporal graphs are commonly used to represent complex systems and track the evolution of their constituents over time. Visualizing these graphs is crucial as it allows one to quickly identify anomalies, trends, patterns, and other…

Human-Computer Interaction · Computer Science 2025-02-24 Raphaël Tinarrage , Jean R. Ponciano , Claudio D. G. Linhares , Agma J. M. Traina , Jorge Poco

We apply modern methods in computational topology to the task of discovering and characterizing phase transitions. As illustrations, we apply our method to four two-dimensional lattice spin models: the Ising, square ice, XY, and…

Statistical Mechanics · Physics 2021-10-04 Alex Cole , Gregory J. Loges , Gary Shiu

Feature extraction in noisy image datasets presents many challenges in model reliability. In this paper, we use the discrete Fourier transform in conjunction with persistent homology analysis to extract specific frequencies that correspond…

Computer Vision and Pattern Recognition · Computer Science 2025-12-09 Anil Chintapalli , Peter Tenholder , Henry Chen , Arjun Rao

We describe a new methodology for studying persistence of topological features across a family of spaces or point-cloud data sets, called zigzag persistence. Building on classical results about quiver representations, zigzag persistence…

Computational Geometry · Computer Science 2008-12-02 Gunnar Carlsson , Vin de Silva

In this paper we study the persistent homology associated with topological crackle generated by distributions with an unbounded support. Persistent homology is a topological and algebraic structure that tracks the creation and destruction…

Probability · Mathematics 2018-10-04 Takashi Owada , Omer Bobrowski

Hypergraph data appear and are hidden in many places in the modern age. They are data structure that can be used to model many real data examples since their structures contain information about higher order relations among data points. One…

Social and Information Networks · Computer Science 2020-10-02 Dong Quan Ngoc Nguyen , Lin Xing , Lizhen Lin

Random walks on networks are widely used to model stochastic processes such as search strategies, transportation problems or disease propagation. A prominent example of such process is the guiding of naive T cells by the lymph node conduits…

Social and Information Networks · Computer Science 2022-10-21 Solène Song , Malek Senoussi , Paul Escande , Paul Villoutreix

Persistent homology (PH) is a recently developed theory in the field of algebraic topology to study shapes of datasets. It is an effective data analysis tool that is robust to noise and has been widely applied. We demonstrate a general…

Signal Processing · Electrical Eng. & Systems 2020-05-05 Yu-Min Chung , Chuan-Shen Hu , Yu-Lun Lo , Hau-Tieng Wu

We introduce an easily computable topological measure which locates the effective crossover between segregation and integration in a modular network. Segregation corresponds to the degree of network modularity, while integration is…

Adaptation and Self-Organizing Systems · Physics 2012-06-18 A. Ajdari Rad , I. Sendiña-Nadal , D. Papo , M. Zanin , J. M. Buldú , F. del Pozo , S. Boccaletti

Topological data analysis (TDA) is a rising branch in modern applied mathematics. It extracts topological structures as features of a given space and uses these features to analyze digital data. Persistent homology, one of the central tools…

Algebraic Topology · Mathematics 2025-05-26 Chuan-Shen Hu

We present a topological framework for analysing neural time series that integrates Transfer Entropy (TE) with directed Persistent Homology (PH) to characterize information flow in spiking neural systems. TE quantifies directional influence…

Neurons and Cognition · Quantitative Biology 2025-08-27 Dylan Peek , Siddharth Pritam , Matthew P. Skerritt , Stephan Chalup

We employ techniques from topological data analysis to model sensor networks. Our approach to sensor integration uses the topological method of sheaves over cell complexes. The internal consistency of data from individual sensors is…

Networking and Internet Architecture · Computer Science 2016-12-02 Brenda Praggastis

Complex networks encountered in biology are often characterized by significant structural diversity. Whether it be differences in the three-dimensional structure of allosteric proteins, or the variation among the micro-scale structures of…

Physics and Society · Physics 2020-08-19 Jason W. Rocks , Andrea J. Liu , Eleni Katifori

In this work we study the topological properties of temporal hypergraphs. Hypergraphs provide a higher dimensional generalization of a graph that is capable of capturing multi-way connections. As such, they have become an integral part of…

Computational Geometry · Computer Science 2023-02-07 Audun Myers , Cliff Joslyn , Bill Kay , Emilie Purvine , Gregory Roek , Madelyn Shapiro

The topology method is an algorithm for accurate estimation of instantaneous heartbeat intervals using millimeter-wave radar signals. In this model, feature points are extracted from the skin displacement waveforms generated by heartbeats…

Signal Processing · Electrical Eng. & Systems 2024-02-23 Yuji Tanaka , Kimitaka Sumi , Itsuki Iwata , Takuya Sakamoto
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