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We revisit the problem of computing the edit distance of a regular language given via an NFA. This problem relates to the inherent maximal error-detecting capability of the language in question. We present an efficient algorithm for solving…

Formal Languages and Automata Theory · Computer Science 2014-06-05 Lila Kari , Stavros Konstantinidis , Steffen Kopecki , Meng Yang

Classically, the edit distance of two length-$n$ strings can be computed in $O(n^2)$ time, whereas an $O(n^{2-\epsilon})$-time procedure would falsify the Orthogonal Vectors Hypothesis. If the edit distance does not exceed $k$, the running…

Data Structures and Algorithms · Computer Science 2023-11-06 Daniel Gibney , Ce Jin , Tomasz Kociumaka , Sharma V. Thankachan

We consider the following model for sampling pairs of strings: $s_1$ is a uniformly random bitstring of length $n$, and $s_2$ is the bitstring arrived at by applying substitutions, insertions, and deletions to each bit of $s_1$ with some…

Data Structures and Algorithms · Computer Science 2020-07-08 Arun Ganesh , Aaron Sy

The tree edit distance (TED) between two rooted ordered trees with $n$ nodes labeled from an alphabet $\Sigma$ is the minimum cost of transforming one tree into the other by a sequence of valid operations consisting of insertions, deletions…

Data Structures and Algorithms · Computer Science 2025-04-02 Jakob Nogler , Adam Polak , Barna Saha , Virginia Vassilevska Williams , Yinzhan Xu , Christopher Ye

Edit distance between trees is a natural generalization of the classical edit distance between strings, in which the allowed elementary operations are contraction, uncontraction and relabeling of an edge. Demaine et al. [ACM Trans. on…

Data Structures and Algorithms · Computer Science 2018-04-27 Bartłomiej Dudek , Paweł Gawrychowski

The approximate period recovery problem asks to compute all $\textit{approximate word-periods}$ of a given word $S$ of length $n$: all primitive words $P$ ($|P|=p$) which have a periodic extension at edit distance smaller than $\tau_p$ from…

Data Structures and Algorithms · Computer Science 2018-07-30 Tomasz Kociumaka , Jakub Radoszewski , Wojciech Rytter , Juliusz Straszyński , Tomasz Waleń , Wiktor Zuba

The Dyck language, which consists of well-balanced sequences of parentheses, is one of the most fundamental context-free languages. The Dyck edit distance quantifies the number of edits (character insertions, deletions, and substitutions)…

Data Structures and Algorithms · Computer Science 2021-12-14 Debarati Das , Tomasz Kociumaka , Barna Saha

The edit distance between two words $w_1, w_2$ is the minimal number of word operations (letter insertions, deletions, and substitutions) necessary to transform $w_1$ to $w_2$. The edit distance generalizes to languages $\mathcal{L}_1,…

Formal Languages and Automata Theory · Computer Science 2019-03-14 Krishnendu Chatterjee , Thomas A. Henzinger , Rasmus Ibsen-Jensen , Jan Otop

We present the first dynamic algorithms for Dyck and tree edit distances with subpolynomial update times. Dyck edit distance measures how far a parenthesis string is from a well-parenthesized expression, while tree edit distance quantifies…

Data Structures and Algorithms · Computer Science 2025-10-21 Debarati Das , Jacob Gilbert , MohammadTaghi Hajiaghayi , Tomasz Kociumaka , Barna Saha

The Swap-Insert Correction distance from a string $S$ of length $n$ to another string $L$ of length $m\geq n$ on the alphabet $[1..d]$ is the minimum number of insertions, and swaps of pairs of adjacent symbols, converting $S$ into $L$.…

Data Structures and Algorithms · Computer Science 2015-06-30 Jérémy Barbay , Pablo Pérez-Lantero

String similarity, longest common subsequence and shortest edit scripts are the triplets of problem that related to each other. There are different algorithms exist to generate edit script by solving longest common subsequence problem. This…

Data Structures and Algorithms · Computer Science 2022-08-19 P. Prakash Maria Liju

We present a unified framework for accelerating edit-distance computation between two compressible strings using straight-line programs. For two strings of total length $N$ having straight-line program representations of total size $n$, we…

Computational Complexity · Computer Science 2009-02-17 Danny Hermelin , Gad M. Landau , Shir Landau , Oren Weimann

We consider the approximate pattern matching problem under the edit distance. Given a text $T$ of length $n$, a pattern $P$ of length $m$, and a threshold $k$, the task is to find the starting positions of all substrings of $T$ that can be…

Data Structures and Algorithms · Computer Science 2022-04-08 Panagiotis Charalampopoulos , Tomasz Kociumaka , Philip Wellnitz

The {\em edit distance} between two ordered trees with vertex labels is the minimum cost of transforming one tree into the other by a sequence of elementary operations consisting of deleting and relabeling existing nodes, as well as…

Data Structures and Algorithms · Computer Science 2010-12-01 Erik D. Demaine , Shay Mozes , Benjamin Rossman , Oren Weimann

Edit distance similarity search, also called approximate pattern matching, is a fundamental problem with widespread database applications. The goal of the problem is to preprocess $n$ strings of length $d$, to quickly answer queries $q$ of…

Data Structures and Algorithms · Computer Science 2020-07-10 Samuel McCauley

We present an algorithm for approximating the edit distance $\operatorname{ed}(x, y)$ between two strings $x$ and $y$ in time parameterized by the degree to which one of the strings $x$ satisfies a natural pseudorandomness property. The…

Data Structures and Algorithms · Computer Science 2018-11-13 William Kuszmaul

In the longest common substring (LCS) problem, we are given two strings $S$ and $T$, each of length at most $n$, and we are asked to find a longest string occurring as a fragment of both $S$ and $T$. This is a classical and well-studied…

Data Structures and Algorithms · Computer Science 2018-07-17 Amihood Amir , Panagiotis Charalampopoulos , Solon P. Pissis , Jakub Radoszewski

We show that the edit distance between two run-length encoded strings of compressed lengths $m$ and $n$ respectively, can be computed in $\mathcal{O}(mn\log(mn))$ time. This improves the previous record by a factor of…

Data Structures and Algorithms · Computer Science 2019-05-06 Raphaël Clifford , Paweł Gawrychowski , Tomasz Kociumaka , Daniel P. Martin , Przemysław Uznański

Large language models (LLMs) acquire knowledge during pre-training, but over time, this knowledge may become incorrect or outdated, necessitating updates after training. Knowledge editing techniques address this issue without the need for…

Computation and Language · Computer Science 2024-10-16 Yuchen Cai , Ding Cao

We introduce fast-decodable indexing schemes for edit distance which can be used to speed up edit distance computations to near-linear time if one of the strings is indexed by an indexing string $I$. In particular, for every length $n$ and…

Data Structures and Algorithms · Computer Science 2019-04-11 Bernhard Haeupler , Aviad Rubinstein , Amirbehshad Shahrasbi