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In an edge modification problem, we are asked to modify at most $k$ edges to a given graph to make the graph satisfy a certain property. Depending on the operations allowed, we have the completion problems and the edge deletion problems. A…

Data Structures and Algorithms · Computer Science 2021-04-30 Yixin Cao , Yuping Ke

Most networks found in social and biochemical systems have modular structures. An important question prompted by the modularity of these networks is whether nodes can be said to belong to a single group. If they cannot, we would need to…

Data Analysis, Statistics and Probability · Physics 2009-05-02 Erin N. Sawardecker , Marta Sales-Pardo , Luís A. Nunes Amaral

For a given graph $G$, a depth-first search (DFS) tree $T$ of $G$ is an $r$-rooted spanning tree such that every edge of $G$ is either an edge of $T$ or is between a \textit{descendant} and an \textit{ancestor} in $T$. A graph $G$ together…

Data Structures and Algorithms · Computer Science 2023-07-21 Emmanuel Sam , Benjamin Bergougnoux , Petr A. Golovach , Nello Blaser

The starting point of our work is a decade-old open question concerning the subexponential parameterized complexity of \textsc{2-Layer Crossing Minimization}. In this problem, the input is an $n$-vertex graph $G$ whose vertices are…

Data Structures and Algorithms · Computer Science 2025-10-16 Fedor V. Fomin , Petr A. Golovach , Tanmay Inamdar , Saket Saurabh , Meirav Zehavi

We propose an algorithm for finding overlapping community structure in very large networks. The algorithm is based on the label propagation technique of Raghavan, Albert, and Kumara, but is able to detect communities that overlap. Like the…

Physics and Society · Physics 2010-10-15 Steve Gregory

A hedge graph is a graph whose edge set has been partitioned into groups called hedges. Here we consider a generalization of the well-known \textsc{Cluster Deletion} problem, named \textsc{Hedge Cluster Deletion}. The task is to compute the…

Data Structures and Algorithms · Computer Science 2025-12-05 Athanasios L. Konstantinidis , Charis Papadopoulos , Georgios Velissaris

We consider a natural generalization of Vertex Cover: the Subset Vertex Cover problem, which is to decide for a graph $G=(V,E)$, a subset $T\subseteq V$ and integer $k$, if $V$ has a subset $S$ of size at most $k$, such that $S$ contains at…

An \emph{$H$-packing} in a graph $G$ is a collection of pairwise vertex-disjoint copies of $H$ in $G$. We prove that for every $c > 0$ and every bipartite graph $H$, any $\lfloor cn \rfloor$-regular graph $G$ admits an $H$-packing that…

Combinatorics · Mathematics 2026-02-03 Shoham Letzter , Abhishek Methuku , Benny Sudakov

A "community" in a social network is usually understood to be a group of nodes more densely connected with each other than with the rest of the network. This is an important concept in most domains where networks arise: social,…

Social and Information Networks · Computer Science 2011-12-09 Sanjeev Arora , Rong Ge , Sushant Sachdeva , Grant Schoenebeck

A permutation graph can be defined as an intersection graph of segments whose endpoints lie on two parallel lines $\ell_1$ and $\ell_2$, one on each. A bipartite permutation graph is a permutation graph which is bipartite. In the the…

Data Structures and Algorithms · Computer Science 2024-01-03 Jan Derbisz

A total dominating set of a graph $G=(V,E)$ is a subset $D \subseteq V$ such that every vertex in $V$ is adjacent to some vertex in $D$. Finding a total dominating set of minimum size is NP-hard on planar graphs and W[2]-complete on general…

Data Structures and Algorithms · Computer Science 2023-06-22 Valentin Garnero , Ignasi Sau

In this paper, we use a partition of the links of a network in order to uncover its community structure. This approach allows for communities to overlap at nodes, so that nodes may be in more than one community. We do this by making a node…

Physics and Society · Physics 2009-07-24 T. S. Evans , R. Lambiotte

We study the CONNECTED \eta-TREEDEPTH DELETION problem where the input instance is an undireted graph G = (V, E) and an integer k. The objective is to decide if G has a set S \subseteq V(G) of at most k vertices such that G - S has…

Data Structures and Algorithms · Computer Science 2022-12-02 Eduard Eiben , Diptapriyo Majumdar , M. S. Ramanujan

The \textsc{$l$-Exact Component Order Connectivity} problem asks whether, given an input graph $G$ and an integer $k$, there exists a vertex subset $S\subseteq V(G)$ of size at most $k$ such that every connected component in $G - S$ has…

Data Structures and Algorithms · Computer Science 2026-05-20 Yuxi Liu , Mingyu Xiao

We study two fundamental problems related to finding subgraphs: (1) given graphs G and H, Subgraph Test asks if H is isomorphic to a subgraph of G, (2) given graphs G, H, and an integer t, Packing asks if G contains t vertex-disjoint…

Data Structures and Algorithms · Computer Science 2014-10-06 Bart M. P. Jansen , Dániel Marx

The $H$-Free Edge Deletion problem asks, for a given graph $G$ and an integer $k$, whether it is possible to delete at most $k$ edges from $G$ to make it $H$-free, that is, not containing $H$ as an induced subgraph. The $H$-Free Edge…

Data Structures and Algorithms · Computer Science 2018-05-15 Ivan Bliznets , Marek Cygan , Pawel Komosa , Michal Pilipczuk

The class of graph deletion problems has been extensively studied in theoretical computer science, particularly in the field of parameterized complexity. Recently, a new notion of graph deletion problems was introduced, called deletion to…

Data Structures and Algorithms · Computer Science 2026-05-20 Ashwin Jacob , Diptapriyo Majumdar , Meirav Zehavi

Typical R-convolution graph kernels invoke the kernel functions that decompose graphs into non-isomorphic substructures and compare them. However, overlooking implicit similarities and topological position information between those…

Machine Learning · Computer Science 2024-05-10 Shuhao Tang , Hao Tian , Xiaofeng Cao , Wei Ye

For a finite set $X$, we say that a set $H\subseteq X$ crosses a partition ${\cal P}=(X_1,\dots,X_k)$ of $X$ if $H$ intersects $\min (|H|,k)$ partition classes. If $|H|\geq k$, this means that $H$ meets all classes $X_i$, whilst for…

Combinatorics · Mathematics 2018-02-28 Csilla Bujtás , Zsolt Tuza

Ordered matchings, defined as graphs with linearly ordered vertices, where each vertex is connected to exactly one edge, play a crucial role in the area of ordered graphs and their homomorphisms. Therefore, we consider related problems from…

Computational Complexity · Computer Science 2025-12-01 Michal Čertík , Andreas Emil Feldmann , Jaroslav Nešetřil , Paweł Rzążewski