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Background: This study proposes a Vision-Language Model (VLM) leveraging the SIGLIP encoder and Gemma-3b transformer decoder to enhance automated chronic tuberculosis (TB) screening. By integrating chest X-ray images with clinical data, the…

Automated cardiac image interpretation has the potential to transform clinical practice in multiple ways including enabling low-cost serial assessment of cardiac function in the primary care and rural setting. We hypothesized that advances…

While deep learning has exhibited remarkable predictive capabilities in various medical image tasks, its inherent black-box nature has hindered its widespread implementation in real-world healthcare settings. Our objective is to unveil the…

Computer Vision and Pattern Recognition · Computer Science 2025-04-08 Han Yuan , Lican Kang , Yong Li

Biomedical research results are being published at a high rate, and with existing search engines, the vast amount of published work is usually easily accessible. However, reproducing published results, either experimental data or…

Molecular Networks · Quantitative Biology 2017-06-19 Kai-Wen Liang , Qinsi Wang , Cheryl Telmer , Divyaa Ravichandran , Peter Spirtes , Natasa Miskov-Zivanov

The design of molecules and materials with tailored properties is challenging, as candidate molecules must satisfy multiple competing requirements that are often difficult to measure or compute. While molecular structures, produced through…

Chemical Physics · Physics 2023-02-07 Julia Westermayr , Joe Gilkes , Rhyan Barrett , Reinhard J. Maurer

Morphological profiling is a valuable tool in phenotypic drug discovery. The advent of high-throughput automated imaging has enabled the capturing of a wide range of morphological features of cells or organisms in response to perturbations…

Lung cancer, particularly in its advanced stages, remains a leading cause of death globally. Though early detection via low-dose computed tomography (CT) is promising, the identification of high-risk factors crucial for surgical mode…

Image and Video Processing · Electrical Eng. & Systems 2023-08-29 Xiaotong Fu , Xiangyu Meng , Jing Zhou , Ying Ji

The determination of potentials of mean force for solute insertion in a membrane by means of all-atom molecular dynamics simulations is often hampered by sampling issues. A multiscale approach to conformational sampling was recently…

Chemical Physics · Physics 2017-10-09 Roberto Menichetti , Kurt Kremer , Tristan Bereau

Retinal blood vessels structure contains information about diseases like obesity, diabetes, hypertension and glaucoma. This information is very useful in identification and treatment of these fatal diseases. To obtain this information,…

Image and Video Processing · Electrical Eng. & Systems 2020-12-08 Sushil Kumar Saroj , Vikas Ratna , Rakesh Kumar , Nagendra Pratap Singh

We have used a combined dynamic scanning tunneling and atomic force microscope to study the organisation of weakly bound adsorbed molecules on a graphite substrate. Specifically we have acquired images of islands of the perylene derivative…

Materials Science · Physics 2009-11-13 N. Berdunov , A. J. Pollard , P. H. Beton

The random energy landscapes developed by speckle fields can be used to confine and manipulate a large number of micro-particles with a single laser beam. By means of molecular dynamics simulations, we investigate the static and dynamic…

Statistical Mechanics · Physics 2014-08-22 M. Paoluzzi , R. Di Leonardo , L. Angelani

High-throughput gene perturbation experiments can test several genetic interventions in parallel, yet experimental budgets remain limited. A central goal is hit discovery: identifying as many perturbations as possible whose phenotypic…

Machine Learning · Computer Science 2026-05-12 Andrea Rubbi , Arpit Merchant , Samuel Ogden , Amir Akbarnejad , Pietro Liò , Sattar Vakili , Mo Lotfollahi

GAMMA Challenge is organized to encourage the AI models to screen the glaucoma from a combination of 2D fundus image and 3D optical coherence tomography volume, like the ophthalmologists.

Image and Video Processing · Electrical Eng. & Systems 2022-09-26 Junde Wu , Huihui Fang , Fei Li , Huazhu Fu , Yanwu Xu

High-throughput screening techniques, such as microscopy imaging of cellular responses to genetic and chemical perturbations, play a crucial role in drug discovery and biomedical research. However, robust perturbation screening for…

Computer Vision and Pattern Recognition · Computer Science 2025-07-16 Jiayuan Chen , Thai-Hoang Pham , Yuanlong Wang , Ping Zhang

Biological screens are plagued by false positive hits resulting from aggregation. Thus, methods to triage small colloidally aggregating molecules (SCAMs) are in high demand. Herein, we disclose a bespoke machine-learning tool to confidently…

Quantitative Methods · Quantitative Biology 2021-05-04 Kuan Lee , Ann Yang , Yen-Chu Lin , Daniel Reker , Goncalo J. L. Bernardes , Tiago Rodrigues

Modern high-throughput gene perturbation screens are key technologies at the forefront of genetic research. Combined with rich phenotypic descriptors they enable researchers to observe detailed cellular reactions to experimental…

Molecular Networks · Quantitative Biology 2010-10-08 Florian Markowetz

G protein-coupled receptors (GPCRs) govern diverse physiological processes and are central to modern pharmacology. Yet discovering GPCR modulators remains challenging because receptor activation often arises from complex allosteric effects…

Machine Learning · Computer Science 2026-02-03 Jingjie Ning , Xiangzhen Shen , Li Hou , Shiyi Shen , Jiahao Yang , Junrui Li , Hong Shan , Sanan Wu , Sihan Gao , H. Eric Xu , Xinheng He

Strong gravitational lensing can produce copies of gravitational-wave signals from the same source with the same waveform morphologies but different amplitudes and arrival times. Some of these strongly-lensed gravitational-wave signals can…

General Relativity and Quantum Cosmology · Physics 2025-09-19 Alvin K. Y. Li , Juno C. L. Chan , Heather Fong , Aidan H. Y. Chong , Alan J. Weinstein , Jose M. Ezquiaga

This paper considers membranes of globular structure in the framework of the cell model technique. Coupled micropolar and Brinkman-type equations are used to model the flow of micropolar fluid through a spherical cell, consisting of solid…

Fluid Dynamics · Physics 2020-05-05 D. Yu. Khanukaeva

Epithelial cell layers on soft elastic substrates or pillar arrays are commonly used as model systems for investigating the role of force in tissue growth, maintenance and repair. Here we show analytically that the experimentally observed…

Tissues and Organs · Quantitative Biology 2012-01-16 Carina M. Edwards , Ulrich S. Schwarz