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Spatial self-organization emerges in distributed systems exhibiting local interactions when nonlinearities and the appropriate propagation of signals are at work. These kinds of phenomena can be modeled with different frameworks, typically…

Cell Behavior · Quantitative Biology 2016-11-23 Adriano Bonforti , Salva Duran-Nebreda , Raul Montañez , Ricard Solé

How patterns and structures undergo symmetry breaking and self-organize within biological systems from initially homogeneous states is a key issue for biological development. The activator-inhibitor (AI) mechanism, derived from…

Biological Physics · Physics 2022-11-01 Xiaoliang Wang , Andrew Harrison

The aim of this paper is to contribute to the understanding of the pattern formation phenomenon in reaction-diffusion equations coupled with ordinary differential equations. Such systems of equations arise, for example, from modeling of…

Analysis of PDEs · Mathematics 2016-07-15 Anna Marciniak-Czochra , Grzegorz Karch , Kanako Suzuki

The kinetics of encounter-controlled processes in growing domains is markedly different from that in a static domain. Here, we consider the specific example of diffusion limited coalescence and annihilation reactions in one-dimensional…

Statistical Mechanics · Physics 2018-10-22 F. Le Vot , C. Escudero , E. Abad , S. B. Yuste

In this work we investigate the process of pattern formation in a two dimensional domain for a reaction-diffusion system with nonlinear diffusion terms and the competitive Lotka-Volterra kinetics. The linear stability analysis shows that…

Pattern Formation and Solitons · Physics 2014-03-03 G. Gambino , M. C. Lombardo , M. Sammartino

This article describes a reduction of a nonautonomous Brusselator reaction-diffusion system of partial differential equations on a spherical cap with time dependent curvature using the method of centre manifold reduction. Parameter values…

Dynamical Systems · Mathematics 2018-10-12 Laurent Charette , Colin B. Macdonald , Wayne Nagata

The study of pattern-forming instabilities in reaction-diffusion systems on growing or otherwise time-dependent domains arises in a variety of settings, including applications in developmental biology, spatial ecology, and experimental…

Pattern Formation and Solitons · Physics 2022-07-11 Robert A. Van Gorder , Václav Klika , Andrew L. Krause

Spatial and temporal pattern formation in reaction-diffusion systems is typically studied with two or more equations, as scalar reaction-diffusion equations confined to convex domains do not admit stable inhomogeneous states in time or…

Pattern Formation and Solitons · Physics 2026-05-07 N. Mahashri , Andrew L. Krause , M. Chandru , Thomas E. Woolley

The theory of patterns formation for a reaction-diffusion system defined on a multiplex is developed by means of a perturbative approach. The intra-layer diffusion constants act as small parameter in the expansion and the unperturbed state…

Statistical Mechanics · Physics 2015-06-22 Malbor Asllani , Daniel M. Busiello , Timoteo Carletti , Duccio Fanelli , Gwendoline Planchon

Nucleation and growth is studied in a system undergoing diffusion-controlled condensation under gradual changes in parameters, such as cooling. It is demonstrated that when Gibbs-Thompson effect becomes negligible, the system falls into a…

Soft Condensed Matter · Physics 2025-03-14 Alexei V. Tkachenko

We present theoretical and experimental studies on pattern formation with bistable dynamical units coupled in a star network configuration. By applying a localized perturbation to the central or the peripheral elements, we demonstrate the…

Adaptation and Self-Organizing Systems · Physics 2017-04-19 Nikos E Kouvaris , Michael Sebek , Albert Iribarne , Albert Diaz-Guilera , Istvan Z Kiss

We consider flocking of self-propelling agents in two dimensions, each of which communicates with its neighbors within a limited vision cone. Also, the communication occurs with some delay. The communication among the agents are modeled by…

Soft Condensed Matter · Physics 2018-03-13 Mihir Durve , Arnab Saha , Ahmed Sayeed

Reaction--diffusion mechanism are a robust paradigm that can be used to represent many biological and physical phenomena over multiple spatial scales. Applications include intracellular dynamics, the migration of cells and the patterns…

Quantitative Methods · Quantitative Biology 2021-01-01 Cameron A. Smith , Christian A. Yates

In the bistable regime of the FitzHugh-Nagumo model of reaction-diffusion systems, spatially homogeneous patterns may be nonlinearly unstable to the formation of compact ``localized states." The formation of space-filling patterns from…

Condensed Matter · Physics 2009-10-28 Raymond E. Goldstein , David J. Muraki , Dean M. Petrich

The rates of activated processes, such as escape from a metastable state and nucleation, are exponentially sensitive to an externally applied field. We describe how this applies to modulation by high-frequency fields and illustrate it with…

Statistical Mechanics · Physics 2007-05-23 M. I. Dykman , Brage Golding

A reaction-diffusion system exhibiting Turing's diffusion driven instability is considered. The equation for an activator is supplemented by unilateral terms of the type $s_{-}(x)u^{-}$, $s_{+}(x)u^{+}$ describing sources and sinks active…

Analysis of PDEs · Mathematics 2018-07-25 Martin Fencl , Milan Kučera

Traveling fronts and stationary localized patterns in bistable reaction-diffusion systems have been broadly studied for classical continuous media and regular lattices. Analogs of such non-equilibrium patterns are also possible in networks.…

Pattern Formation and Solitons · Physics 2012-10-29 Nikos E. Kouvaris , Hiroshi Kori , Alexander S. Mikhailov

Spatio-temporal bifurcations and complex dynamics in globally coupled intrinsically bistable electrochemical systems with an S-shaped current-voltage characteristic under galvanostatic control are studied theoretically on a one-dimensional…

Pattern Formation and Solitons · Physics 2016-08-16 F. Plenge , P. Rodin , E. Schöll , K. Krischer

We develop an agent-based model of the motion and pattern formation of vesicles. These intracellular particles can be found in four different modes of (undirected and directed) motion and can fuse with other vesicles. While the size of…

Subcellular Processes · Quantitative Biology 2011-09-19 Mirko Birbaumer , Frank Schweitzer

We analyse a dynamic control problem for scalar reaction-diffusion equations, focusing on the emulation of pattern formation through the selection of appropriate active controls. While boundary controls alone prove inadequate for…

Optimization and Control · Mathematics 2024-07-26 Domènec Ruiz-Balet , Enrique Zuazua