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Self-assembly is a process which is ubiquitous in natural, especially biological systems. It occurs when groups of relatively simple components spontaneously combine to form more complex structures. While such systems have inspired a large…

Computational Geometry · Computer Science 2018-07-19 Jerome Durand-Lose , Jacob Hendricks , Matthew J. Patitz , Ian Perkins , Michael Sharp

In the interstellar medium, as well as in the Universe, large density fluctuations are observed, that obey power-law density distributions and correlation functions. These structures are hierarchical, chaotic, turbulent, but are also…

Astrophysics · Physics 2016-08-30 Francoise Combes

Self-assembly is the mechanism that controls the formation of well defined structures from disordered pre-existing parts. Despite the importance of self-assembly as a manufacturing method and the increasingly large number of experimental…

Soft Condensed Matter · Physics 2007-08-15 Emanuela Bianchi , Emilia La Nave , Piero Tartaglia , Francesco Sciortino

Spontaneous self-assembly in molecular systems is a fundamental route to both biological and engineered soft matter. Simple micellisation, emulsion formation, and polymer mixing principles are well understood. However, the principles behind…

Soft Condensed Matter · Physics 2021-09-21 Alberto Scacchi , Sousa Javan Nikkhah , Maria Sammalkorpi , Tapio Ala-Nissila

The inclusion of a fragmentation mechanism in population balance equations introduces complex interactions that make the analytical or even computational treatment much more difficult than for the pure aggregation case. This is specially…

Disordered Systems and Neural Networks · Physics 2022-03-14 Arturo Berrones-Santos , Luis Benavides-Vázquez , Elisa Schaeffer , Javier Almaguer

We develop a new definition of fractals which can be considered as an abstraction of the fractals determined through self-similarity. The definition is formulated through imposing conditions which are governed the relation between the…

Metric Geometry · Mathematics 2019-08-13 Marat Akhmet , Ejaily Milad Alejaily

Modeling potential alloys requires the exploration of all possible configurations of atoms. Additionally, modeling the thermal properties of materials requires knowledge of the possible ways of displacing the atoms. One solution to finding…

Materials Science · Physics 2017-01-11 Wiley S. Morgan , Gus L. W. Hart , Rodney W. Forcade

We systematically explore the self-assembly of semi-flexible polymers in deformable spherical confinement across a wide regime of chain stiffness, contour lengths and packing fractions by means of coarse-grained molecular dynamics…

Soft Condensed Matter · Physics 2021-07-12 Maxime M. C. Tortora , Daniel Jost

Self-organisation is the spontaneous emergence of spatio-temporal structures and patterns from the interaction of smaller individual units. Examples are found across many scales in very different systems and scientific disciplines, from…

Fractons are exotic quasiparticles whose mobility in space is restricted by symmetries. In potential real-world realisations, fractons are likely lodged to a physical material rather than absolute space. Motivated by this, we propose and…

High Energy Physics - Theory · Physics 2026-05-22 Akash Jain

Cohesive particles form agglomerates that are usually very porous. Their geometry, particularly their fractal dimension, depends on the agglomeration process (diffusion-limited or ballistic growth by adding single particles or…

Soft Condensed Matter · Physics 2023-12-07 Dietrich E. Wolf , Thorsten Pöschel

Self-organized monolayers of highly flexible \Frechet dendrons were deposited on graphite surfaces by solution casting. Scanning tunneling microscopy (STM) reveals an unprecedented variety of patterns with up to seven stable hierarchical…

Mesoscale and Nanoscale Physics · Physics 2011-02-18 B. A. Hermann , C. Rohr , M. Balbás Gambra , A. Malecki , M. S. Malarek , E. Frey , T. Franosch

Fractionation is necessary for self-assembly in multicomponent mixtures. Here, reversible fractionation and crystallization are realized and studied in a two-dimensional binary colloids which is supersaturated by enhancing the attraction…

Soft Condensed Matter · Physics 2020-08-20 Lian Dan Yao , Hong Yu Chen , Yan Shi , Ying Liang , Tian Hui Zhang

We investigate a discrete model consisting of self-propelled particles that obey simple interaction rules. We show that this model can self-organize and exhibit coherent localized solutions in one- and in two-dimensions.In one-dimension,…

Soft Condensed Matter · Physics 2009-10-31 Herbert Levine , Wouter-Jan Rappel , Inon Cohen

We consider a system of clusters made of elementary building blocks, monomers, and evolving via collisions between diffusing monomers and immobile composite clusters. In our model, the cluster-monomer collision can lead to the attachment of…

Statistical Mechanics · Physics 2017-10-25 P. L. Krapivsky , W. Otieno , N. V. Brilliantov

We propose a polymer model for the dynamics of chromatin replication in three dimensional space. Our simulations indicate that both immobile and tracking replisomes may self-assemble during the process, reconciling previous apparently…

Biological Physics · Physics 2023-12-19 G. Forte , S. Buonomo , P. R. Cook , N. Gilbert , D. Marenduzzo , E. Orlandini

Modularization is a cornerstone of computer science, abstracting complex functions into atomic building blocks. In this paper, we introduce a new level of modularization by abstracting generative models into atomic generative modules.…

Machine Learning · Computer Science 2025-02-26 Tianhong Li , Qinyi Sun , Lijie Fan , Kaiming He

Perturbing fluids of neutrons and protons (nuclear matter) may lead, as the most catastrophic effect, to the rearrangement of the fluid into clusters of nucleons. A similar process may occur in a single atomic nucleus undergoing a violent…

Nuclear Theory · Physics 2018-05-23 P. Napolitani , M. Colonna , C. Mancini-Terracciano

Fracton models, a collection of exotic gapped lattice Hamiltonians recently discovered in three spatial dimensions, contain some 'topological' features: they support fractional bulk excitations (dubbed fractons), and a ground state…

Strongly Correlated Electrons · Physics 2019-01-01 Wilbur Shirley , Kevin Slagle , Zhenghan Wang , Xie Chen

The phenomenon of self-organization has been of special interest to the neural network community for decades. In this paper, we study a variant of the Self-Organizing Map (SOM) that models the phenomenon of self-organization of the…

Artificial Intelligence · Computer Science 2021-02-17 Bonny Banerjee