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Phylogenetic networks allow modeling reticulate evolution, capturing events such as hybridization and horizontal gene transfer. A fundamental computational problem in this context is the Tree Containment problem, which asks whether a given…
We prove essentially tight lower bounds, conditionally to the Exponential Time Hypothesis, for two fundamental but seemingly very different cutting problems on surface-embedded graphs: the Shortest Cut Graph problem and the Multiway Cut…
In this paper, we address the problem of enumerating all induced subtrees in an input k-degenerate graph, where an induced subtree is an acyclic and connected induced subgraph. A graph G = (V, E) is a k-degenerate graph if for any its…
Until recently, LP relaxations have played a limited role in the design of approximation algorithms for the Steiner tree problem. In 2010, Byrka et al. presented a ln(4)+epsilon approximation based on a hypergraphic LP relaxation, but…
We present a brief structural equivalence between the symmetric TSP and a constrained Group Steiner Tree Problem (cGSTP) defined on a simplicial incidence graph. Given the complete weighted graph on the city set V, we form the bipartite…
The Travelling Salesman Problem (TSP) is a challenging graph task in combinatorial optimization that requires reasoning about both local node neighborhoods and global graph structure. In this paper, we propose to use the novel Graph…
We introduce the problem of hidden Hamiltonian cycle recovery, where there is an unknown Hamiltonian cycle in an $n$-vertex complete graph that needs to be inferred from noisy edge measurements. The measurements are independent and…
We study the Temporal Exploration problem, where an agent must visit all vertices of a temporal graph while traversing at most one available edge per time step. Unlike static graphs, which can be explored in linear time, temporal…
The $k$-leaf power graph $G$ of a tree $T$ is a graph whose vertices are the leaves of $T$ and whose edges connect pairs of leaves at unweighted distance at most~$k$ in $T$. Recognition of the $k$-leaf power graphs for $k \geq 7$ is still…
In this paper we study a natural generalization of both {\sc $k$-Path} and {\sc $k$-Tree} problems, namely, the {\sc Subgraph Isomorphism} problem. In the {\sc Subgraph Isomorphism} problem we are given two graphs $F$ and $G$ on $k$ and $n$…
The connection between the maximum spanning tree in a directed graph and the best dependency tree of a sentence has been exploited by the NLP community. However, for many dependency parsing schemes, an important detail of this approach is…
Given a graph $G$ and sets $\{\alpha_v~|~v \in V(G)\}$ and $\{\beta_v~|~v \in V(G)\}$ of non-negative integers, it is known that the decision problem whether $G$ contains a spanning tree $T$ such that $\alpha_v \le d_T (v) \le \beta_v $ for…
The Metric Traveling Salesman Problem (TSP) is a classical NP-hard optimization problem. The double-tree shortcutting method for Metric TSP yields an exponentially-sized space of TSP tours, each of which approximates the optimal solution…
Working with tree graphs is always easier than with loopy ones and spanning trees are the closest tree-like structures to a given graph. We find a correspondence between the solutions of random K-satisfiability problem and those of spanning…
The traveling salesman problem is a fundamental combinatorial optimization problem with strong exact algorithms. However, as problems scale up, these exact algorithms fail to provide a solution in a reasonable time. To resolve this, current…
The $k$-Opt algorithm is a local search algorithm for the Traveling Salesman Problem. Starting with an initial tour, it iteratively replaces at most $k$ edges in the tour with the same number of edges to obtain a better tour. Krentel (FOCS…
Spanning tree modulus is a generalization of effective resistance that is closely related to graph strength and fractional arboricity. The optimal edge density associated with spanning tree modulus is known to produce two hierarchical…
The complexity of the maximum common connected subgraph problem in partial $k$-trees is still not fully understood. Polynomial-time solutions are known for degree-bounded outerplanar graphs, a subclass of the partial $2$-trees. On the other…
We introduce a graph partitioning problem motivated by computational topology and propose two algorithms that produce approximate solutions. Specifically, given a weighted, undirected graph $G$ and a positive integer $k$, we desire to find…
A graph is a $k$-leaf power of a tree $T$ if its vertices are leaves of $T$ and two vertices are adjacent in $T$ if and only if their distance in $T$ is at most $k$. Then $T$ is a $k$-leaf root of $G$. This notion was introduced by…