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We consider the counting problem of the number of \textit{leaf-labeled increasing trees}, where internal nodes may have an arbitrary number of descendants. The set of all such trees is a discrete representation of the genealogies obtained…

Populations and Evolution · Quantitative Biology 2022-11-08 Johannes Wirtz

This paper introduces a new combinatorial framework for modeling the growth of binary trees through a discrete evolution process that incorporates a growing rule and an extinction rule. Building upon the theory of increasingly labeled…

Combinatorics · Mathematics 2026-03-30 Olivier Bodini , Antoine Genitrini , Khaydar Nurligareev

A number of hook formulas and hook summation formulas have previously appeared, involving various classes of trees. One of these classes of trees is rooted trees with labelled vertices, in which the labels increase along every chain from…

Combinatorics · Mathematics 2015-10-13 Valentin Féray , I. P. Goulden , A. Lascoux

Certain families of combinatorial objects admit recursive descriptions in terms of generating trees: each node of the tree corresponds to an object, and the branch leading to the node encodes the choices made in the construction of the…

We study the asymptotic number of certain monotonically labeled increasing trees arising from a generalized evolution process. The main difference between the presented model and the classical model of binary increasing trees is that the…

Combinatorics · Mathematics 2019-10-30 Olivier Bodini , Antoine Genitrini , Bernhard Gittenberger , Stephan Wagner

Several hook summation formulae for binary trees have appeared recently in the literature. In this paper we present an analogous formula for unordered increasing trees of size r, which involves r parameters. The right-hand side can be…

Combinatorics · Mathematics 2013-04-22 Valentin Féray , I. P. Goulden

We consider weighted generating functions of trees where the weights are products of functions of the sizes of the subtrees. This work begins with the observation that three different communities, largely independently, found substantially…

Combinatorics · Mathematics 2014-12-19 Bradley R. Jones , Karen Yeats

In this short note we discuss recent results on hook length formulas of trees unifying some earlier results, and explain hook length formulas naturally associated to families of increasingly labelled trees.

Combinatorics · Mathematics 2010-04-13 Markus Kuba

Generating trees are a useful technique in the enumeration of various combinatorial objects, particularly restricted permutations. Quite often the generating tree for the set of permutations avoiding a set of patterns requires infinitely…

Combinatorics · Mathematics 2007-05-23 Vince Vatter

We construct generating trees with one, two, and three labels for some classes of permutations avoiding generalized patterns of length 3 and 4. These trees are built by adding at each level an entry to the right end of the permutation,…

Combinatorics · Mathematics 2007-08-01 Sergi Elizalde

We study three families of labelled plane trees. In all these trees, the root is labelled 0, and the labels of two adjacent nodes differ by $0, 1$ or -1. One part of the paper is devoted to enumerative results. For each family, and for all…

Combinatorics · Mathematics 2008-05-05 Mireille Bousquet-Mélou

We study the enumeration of spinal tree-child phylogenetic networks, a rigid family of tree-child networks in which all internal vertices lie on a single root--to--leaf path. We provide two complementary combinatorial frameworks. First, we…

Combinatorics · Mathematics 2026-05-12 Pau Vives , Anna de Mier , Gabriel Cardona , Joan Carles Pons

We study the enumeration problem for different kind of tree parking functions introduced recently, called tree parking functions, tree parking distributions, prime tree parking functions, and prime tree parking distributions, for rooted…

Combinatorics · Mathematics 2020-07-30 Alois Panholzer

Plane increasing trees are rooted labeled trees embedded into the plane such that the sequence of labels is increasing on any branch starting at the root. Relaxed binary trees are a subclass of unlabeled directed acyclic graphs. We…

Combinatorics · Mathematics 2018-07-12 Michael Wallner

The Exponential Formula allows one to enumerate any class of combinatorial objects built by choosing a set of connected components and placing a structure on each connected component which depends only on its size. There are multiple…

Combinatorics · Mathematics 2023-01-10 Robert Moerman , Lauren K. Williams

We generalize the concept of ascending and descending runs from permutations to rooted labelled trees and mappings, i.e., functions from the set $\{1, \dots, n\}$ into itself. A combinatorial decomposition of the corresponding functional…

Combinatorics · Mathematics 2020-07-06 Marie-Louise Lackner , Alois Panholzer

Given a gene tree and a species tree, ancestral configurations represent the combinatorially distinct sets of gene lineages that can reach a given node of the species tree. They have been introduced as a data structure for use in the…

Populations and Evolution · Quantitative Biology 2016-10-25 Filippo Disanto , Noah A. Rosenberg

Labeled infinite trees provide combinatorial interpretations for many integer sequences generated by nested recurrence relations. Typically, such sequences are monotone increasing. Several of these sequences also have straightforward…

Combinatorics · Mathematics 2022-11-07 Nathan Fox

We provide a fundamental result for bucket increasing trees, which gives a complete characterization of all families of bucket increasing trees that can be generated by a tree evolution process. We also provide several equivalent…

Combinatorics · Mathematics 2022-06-14 Markus Kuba , Alois Panholzer

In mathematical phylogenetics, the time-consistent galled trees provide a simple class of rooted binary network structures that can be used to represent a variety of different biological phenomena. We study the enumerative combinatorics of…

Combinatorics · Mathematics 2025-04-24 Lily Agranat-Tamir , Michael Fuchs , Bernhard Gittenberger , Noah A. Rosenberg
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