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We present an online algorithm to deal with pattern matching in strings. The problem we investigate is commonly known as string matching with mismatches in which the objective is to report the number of characters that match when a pattern…

Data Structures and Algorithms · Computer Science 2016-03-11 Vinodprasad P

A string is said to be closed if its length is one, or if it has a non-empty factor that occurs both as a prefix and as a suffix of the string, but does not occur elsewhere. The notion of closed words was introduced by [Fici, WORDS 2011].…

Data Structures and Algorithms · Computer Science 2024-10-01 Takuya Mieno , Shun Takahashi , Kazuhisa Seto , Takashi Horiyama

Online string matching is a computational problem involving the search for patterns or substrings in a large text dataset, with the pattern and text being processed sequentially, without prior access to the entire text. Its relevance stems…

Data Structures and Algorithms · Computer Science 2023-10-25 Matthew N. Palmer , Simone Faro , Stefano Scafiti

This paper addresses the online exact string matching problem which consists in finding all occurrences of a given pattern p in a text t. It is an extensively studied problem in computer science, mainly due to its direct applications to…

Data Structures and Algorithms · Computer Science 2010-12-14 Simone Faro , Thierry Lecroq

Given a text $T$ of length $n$ and a pattern $P$ of length $m$, the string matching problem is a task to find all occurrences of $P$ in $T$. In this study, we propose an algorithm that solves this problem in $O((n + m)q)$ time considering…

Data Structures and Algorithms · Computer Science 2020-04-14 Satoshi Kobayashi , Diptarama Hendrian , Ryo Yoshinaka , Ayumi Shinohara

Let $S$ be a string of length $n$ over an alphabet $\Sigma$ and let $Q$ be a subset of $\Sigma$ of size $q \geq 2$. The 'co-occurrence problem' is to construct a compact data structure that supports the following query: given an integer $w$…

Data Structures and Algorithms · Computer Science 2022-11-11 Philip Bille , Inge Li Gørtz , Tord Stordalen

Given a string $S$ of length $n$, the classic string indexing problem is to preprocess $S$ into a compact data structure that supports efficient subsequent pattern queries. In the \emph{deterministic} variant the goal is to solve the string…

Data Structures and Algorithms · Computer Science 2016-12-07 Philip Bille , Inge Li Gørtz , Frederik Rye Skjoldjensen

We present two algorithms for maintaining the topological order of a directed acyclic graph with n vertices, under an online edge insertion sequence of m edges. Efficient algorithms for online topological ordering have many applications,…

Data Structures and Algorithms · Computer Science 2007-11-05 Telikepalli Kavitha , Rogers Mathew

We consider the problem of encoding a string of length $n$ from an integer alphabet of size $\sigma$ so that access and substring equality queries (that is, determining the equality of any two substrings) can be answered efficiently. Any…

Data Structures and Algorithms · Computer Science 2020-05-12 Nicola Prezza

We introduce a new string matching problem called order-preserving matching on numeric strings where a pattern matches a text if the text contains a substring whose relative orders coincide with those of the pattern. Order-preserving…

Data Structures and Algorithms · Computer Science 2013-02-19 Jinil Kim , Peter Eades , Rudolf Fleischer , Seok-Hee Hong , Costas S. Iliopoulos , Kunsoo Park , Simon J. Puglisi , Takeshi Tokuyama

We present an $O(n\sqrt{\log n})$ time and linear space algorithm for sorting real numbers. This breaks the long time illusion that real numbers have to be sorted by comparison sorting and take $\Omega (n\log n)$ time to be sorted.

Data Structures and Algorithms · Computer Science 2018-12-04 Yijie Han

Suppose we want to seek the longest common subsequences (LCSs) of two strings as informative patterns that explain the relationship between the strings. The dynamic programming algorithm gives us a table from which all LCSs can be extracted…

Data Structures and Algorithms · Computer Science 2025-05-23 Yoshifumi Sakai

We consider online algorithms for the $k$-server problem on trees. Chrobak and Larmore proposed a $k$-competitive algorithm for this problem that has the optimal competitive ratio. However, a naive implementation of their algorithm has…

Data Structures and Algorithms · Computer Science 2021-07-29 Ruslan Kapralov , Kamil Khadiev , Joshua Mokut , Yixin Shen , Maxim Yagafarov

We study an agglomerative clustering problem motivated by interactive glyphs in geo-visualization. Consider a set of disjoint square glyphs on an interactive map. When the user zooms out, the glyphs grow in size relative to the map,…

Data Structures and Algorithms · Computer Science 2018-05-15 Thom Castermans , Bettina Speckmann , Frank Staals , Kevin Verbeek

We solve the problems of detecting and counting various forms of regularities in a string represented as a Straight Line Program (SLP). Given an SLP of size $n$ that represents a string $s$ of length $N$, our algorithm compute all runs and…

Data Structures and Algorithms · Computer Science 2013-04-29 Tomohiro I , Wataru Matsubara , Kouji Shimohira , Shunsuke Inenaga , Hideo Bannai , Masayuki Takeda , Kazuyuki Narisawa , Ayumi Shinohara

Various grammar compression algorithms have been proposed in the last decade. A grammar compression is a restricted CFG deriving the string deterministically. An efficient grammar compression develops a smaller CFG by finding duplicated…

Data Structures and Algorithms · Computer Science 2016-09-01 Shouhei Fukunaga , Yoshimasa Takabatake , I Tomohiro , Hiroshi Sakamoto

Given a pattern string $P$ of length $n$ and a query string $T$ of length $m$, where the characters of $P$ and $T$ are drawn from an alphabet of size $\Delta$, the {\em exact string matching} problem consists of finding all occurrences of…

Data Structures and Algorithms · Computer Science 2015-10-01 Srikrishnan Divakaran

Circle graphs are the intersection graphs of chords in a circle. This paper presents the first sub-quadratic recognition algorithm for the class of circle graphs. Our algorithm is O(n + m) times the inverse Ackermann function, {\alpha}(n +…

Data Structures and Algorithms · Computer Science 2012-11-01 Emeric Gioan , Christophe Paul , Marc Tedder , Derek Corneil

Given a text $T$ and a pattern $P$ over alphabet $\Sigma$, the classic exact matching problem searches for all occurrences of pattern $P$ in text $T$. Unlike exact matching problem, order-preserving pattern matching (OPPM) considers the…

Data Structures and Algorithms · Computer Science 2017-05-29 Davaajav Jargalsaikhan , Diptarama , Ryo Yoshinaka , Ayumi Shinohara

We study the online variant of the language distance problem for two classical formal languages, the language of palindromes and the language of squares, and for the two most fundamental distances, the Hamming distance and the edit…

Data Structures and Algorithms · Computer Science 2024-05-01 Gabriel Bathie , Tomasz Kociumaka , Tatiana Starikovskaya