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Graph classes of bounded tree rank were introduced recently in the context of the model checking problem for first-order logic of graphs. These graph classes are a common generalization of graph classes of bounded degree and bounded…

Discrete Mathematics · Computer Science 2025-10-08 Jakub Gajarský , Rose McCarty

Many real-world networks describe systems in which interactions decay with the distance between nodes. Examples include systems constrained in real space such as transportation and communication networks, as well as systems constrained in…

Statistical Mechanics · Physics 2009-11-10 Shalev Itzkovitz , Uri Alon

The language of graph theory, or network science, has proven to be an exceptional tool for addressing myriad problems in neuroscience. Yet, the use of networks is predicated on a critical simplifying assumption: that the quintessential unit…

Neurons and Cognition · Quantitative Biology 2016-01-14 Chad Giusti , Robert Ghrist , Danielle S. Bassett

The network reconfiguration problem seeks to find a rooted tree $T$ such that the energy of the (unique) feasible electrical flow over $T$ is minimized. The tree requirement on the support of the flow is motivated by operational constraints…

Data Structures and Algorithms · Computer Science 2023-08-24 Swati Gupta , Ali Khodabakhsh , Hassan Mortagy , Evdokia Nikolova

Large networks are useful in a wide range of applications. Sometimes problem instances are composed of billions of entities. Decomposing and analyzing these structures helps us gain new insights about our surroundings. Even if the final…

We use multiple measures of graph complexity to evaluate the realism of synthetically-generated networks of human activity, in comparison with several stylized network models as well as a collection of empirical networks from the…

Social and Information Networks · Computer Science 2020-02-25 Kiran Karra , Samarth Swarup , Justus Graham

We propose high-order hypergraph walks as a framework to generalize graph-based network science techniques to hypergraphs. Edge incidence in hypergraphs is quantitative, yielding hypergraph walks with both length and width. Graph methods…

Physics and Society · Physics 2020-06-09 Sinan G. Aksoy , Cliff Joslyn , Carlos Ortiz Marrero , Brenda Praggastis , Emilie Purvine

Community detection algorithms have been widely used to study the organization of complex systems like the brain. A principal appeal of these techniques is their ability to identify a partition of brain regions (or nodes) into communities,…

Neurons and Cognition · Quantitative Biology 2017-04-20 Arian Ashourvan , Qawi K. Telesford , Timothy Verstynen , Jean M. Vettel , Danielle S. Bassett

Networks have in recent years emerged as an invaluable tool for describing and quantifying complex systems in many branches of science. Recent studies suggest that networks often exhibit hierarchical organization, where vertices divide into…

Machine Learning · Statistics 2008-11-05 Aaron Clauset , Cristopher Moore , M. E. J. Newman

Two graph parameters are said to be coarsely equivalent if they are within constant factors from each other for every graph $G$. Recently, several graph parameters were shown to be coarsely equivalent to tree-length. Recall that the length…

Combinatorics · Mathematics 2025-02-04 Feodor F. Dragan

We study the tailoring of structured random graph ensembles to real networks, with the objective of generating precise and practical mathematical tools for quantifying and comparing network topologies macroscopically, beyond the level of…

Disordered Systems and Neural Networks · Physics 2015-05-13 A. Annibale , A. C. C. Coolen , L. P. Fernandes , F. Fraternali , J. Kleinjung

Community structures are critical for understanding the mesoscopic organization of networks, bridging local and global patterns. While methods such as DeepWalk and node2vec capture local positional information through random walks, they…

Social and Information Networks · Computer Science 2024-12-19 He Yu , Jing Liu

The exponential growth in scale and relevance of social networks enable them to provide expansive insights. Predicting missing links in social networks efficiently can help in various modern-day business applications ranging from generating…

Social and Information Networks · Computer Science 2024-03-14 Samarth Khanna , Sree Bhattacharyya , Sudipto Ghosh , Kushagra Agarwal , Asit Kumar Das

The discovery of small world and scale free properties of many real world networks has revolutionized the way we study, analyze, model and process networks. An important way to analyze these complex networks is to visualize them using graph…

Social and Information Networks · Computer Science 2023-04-05 Faraz Zaidi

This study investigates the robustness of graph embedding methods for community detection in the face of network perturbations, specifically edge deletions. Graph embedding techniques, which represent nodes as low-dimensional vectors, are…

Physics and Society · Physics 2025-08-05 Zhi-Feng Wei , Pablo Moriano , Ramakrishnan Kannan

A tree decomposition of the coordinates of a code is a mapping from the coordinate set to the set of vertices of a tree. A tree decomposition can be extended to a tree realization, i.e., a cycle-free realization of the code on the…

Information Theory · Computer Science 2016-11-17 Navin Kashyap

This paper studies graphs that have two tree decompositions with the property that every bag from the first decomposition has a bounded-size intersection with every bag from the second decomposition. We show that every graph in each of the…

Combinatorics · Mathematics 2018-05-21 Vida Dujmović , Gwenaël Joret , Pat Morin , Sergey Norin , David R. Wood

Many computational problems admit fast algorithms on special inputs, however, the required properties might be quite restrictive. E.g., many graph problems can be solved much faster on interval or cographs, or on graphs of small…

Data Structures and Algorithms · Computer Science 2022-09-30 Stefan Kratsch , Florian Nelles

The spanning tree heuristic is a commonly adopted procedure in network inference and estimation. It allows one to generalize an inference method developed for trees, which is usually based on a statistically rigorous approach, to a…

Signal Processing · Electrical Eng. & Systems 2019-05-22 Feng Ji , Wenchang Tang , Wee Peng Tay

Graph clustering is a fundamental problem in unsupervised learning, with numerous applications in computer science and in analysing real-world data. In many real-world applications, we find that the clusters have a significant high-level…

Data Structures and Algorithms · Computer Science 2023-01-02 Peter Macgregor
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