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In microscopy image cell segmentation, it is common to train a deep neural network on source data, containing different types of microscopy images, and then fine-tune it using a support set comprising a few randomly selected and annotated…

Computer Vision and Pattern Recognition · Computer Science 2022-11-21 Youssef Dawoud , Arij Bouazizi , Katharina Ernst , Gustavo Carneiro , Vasileios Belagiannis

We present a novel method for cell segmentation in microscopy images which is inspired by the Generative Adversarial Neural Network (GAN) approach. Our framework is built on a pair of two competitive artificial neural networks, with a…

Computer Vision and Pattern Recognition · Computer Science 2018-09-14 Assaf Arbelle , Tammy Riklin Raviv

Unsupervised image segmentation is an important task in many real-world scenarios where labelled data is of scarce availability. In this paper we propose a novel approach that harnesses recent advances in unsupervised learning using a…

Computer Vision and Pattern Recognition · Computer Science 2022-10-24 Moshe Eliasof , Nir Ben Zikri , Eran Treister

The progress in imaging techniques have allowed the study of various aspect of cellular mechanisms. To isolate individual cells in live imaging data, we introduce an elegant image segmentation framework that effectively extracts cell…

Computer Vision and Pattern Recognition · Computer Science 2016-02-18 Arnaud Browet , Christophe De Vleeschouwer , Laurent Jacques , Navrita Mathiah , Bechara Saykali , Isabelle Migeotte

Semantic segmentation is a crucial step in many Earth observation tasks. Large quantity of pixel-level annotation is required to train deep networks for semantic segmentation. Earth observation techniques are applied to varieties of…

Computer Vision and Pattern Recognition · Computer Science 2021-08-11 Sudipan Saha , Lichao Mou , Muhammad Shahzad , Xiao Xiang Zhu

Unsupervised evaluation of segmentation quality is a crucial step in image segmentation applications. Previous unsupervised evaluation methods usually lacked the adaptability to multi-scale segmentation. A scale-constrained evaluation…

Computer Vision and Pattern Recognition · Computer Science 2016-11-16 Yuhang Lu , Youchuan Wan , Gang Li

Unsupervised image segmentation aims at grouping different semantic patterns in an image without the use of human annotation. Similarly, image clustering searches for groupings of images based on their semantic content without supervision.…

Computer Vision and Pattern Recognition · Computer Science 2024-01-18 Isaac Wasserman , Jeova Farias Sales Rocha Neto

We describe a fully-automatic 3D-segmentation technique for brain MR images. Using Markov random fields the segmentation algorithm captures three important MR features, i.e. non-parametric distributions of tissue intensities, neighborhood…

Computer Vision and Pattern Recognition · Computer Science 2009-03-20 Karsten Held , Elena Rota Kops , Bernd J. Krause , William M. Wells , Ron Kikinis , Hans-Wilhelm Mueller-Gaertner

Most existing methods for object segmentation in computer vision are formulated as a labeling task. This, in general, could be transferred to a pixel-wise label assignment task, which is quite similar to the structure of hidden Markov…

Computer Vision and Pattern Recognition · Computer Science 2019-05-21 Shangxuan Wu , Xinshuo Weng

Image segmentation, the process of partitioning an image into meaningful regions, plays a pivotal role in computer vision and medical imaging applications. Unsupervised segmentation, particularly in the absence of labeled data, remains a…

Computer Vision and Pattern Recognition · Computer Science 2024-05-13 Kovvuri Sai Gopal Reddy , Bodduluri Saran , A. Mudit Adityaja , Saurabh J. Shigwan , Nitin Kumar

In this paper, we propose an efficient pseudo-marginal Markov chain Monte Carlo (MCMC) sampling approach to draw samples from posterior shape distributions for image segmentation. The computation time of the proposed approach is independent…

Computer Vision and Pattern Recognition · Computer Science 2018-09-05 Ertunc Erdil , Sinan Yildirim , Tolga Tasdizen , Mujdat Cetin

Automated experiments in scanning transmission electron microscopy (STEM) require rapid image segmentation to optimize data representation for human interpretation, decision-making, site-selective spectroscopies, and atomic manipulation.…

Materials Science · Physics 2024-09-23 Kamyar Barakati , Utkarsh Pratiush , Austin C. Houston , Gerd Duscher , Sergei V. Kalinin

In the effort to aid cytologic diagnostics by establishing automatic single cell screening using high throughput digital holographic microscopy for clinical studies thousands of images and millions of cells are captured. The bottleneck lies…

Image and Video Processing · Electrical Eng. & Systems 2024-10-28 Julia Sistermanns , Ellen Emken , Gregor Weirich , Oliver Hayden , Wolfgang Utschick

We have developed an automatic method for segmenting fluorescence lifetime (FLT) imaging microscopy (FLIM) images of cells inspired by a multi-resolution community detection (MCD) based network segmentation method. The image processing…

Medical Physics · Physics 2014-01-06 Dandan Hu , Pinaki Sarder , Peter Ronhovde , Sandra Orthaus , Samuel Achilefu , Zohar Nussinov

This paper investigates one of the most fundamental computer vision problems: image segmentation. We propose a supervised hierarchical approach to object-independent image segmentation. Starting with over-segmenting superpixels, we use a…

Computer Vision and Pattern Recognition · Computer Science 2016-08-16 Ting Liu , Mojtaba Seyedhosseini , Tolga Tasdizen

We study image segmentation from an information-theoretic perspective, proposing a novel adversarial method that performs unsupervised segmentation by partitioning images into maximally independent sets. More specifically, we group image…

Computer Vision and Pattern Recognition · Computer Science 2021-06-30 Pedro Savarese , Sunnie S. Y. Kim , Michael Maire , Greg Shakhnarovich , David McAllester

In this paper, we propose a new model to segment cells in phase contrast microscopy images. Cell images collected from the similar scenario share a similar background. Inspired by this, we separate cells from the background in images by…

Computer Vision and Pattern Recognition · Computer Science 2019-04-02 Lin Zhang

Video segmentation is a stepping stone to understanding video context. Video segmentation enables one to represent a video by decomposing it into coherent regions which comprise whole or parts of objects. However, the challenge originates…

Computer Vision and Pattern Recognition · Computer Science 2015-07-01 Saehoon Yi , Vladimir Pavlovic

While significant attention has been recently focused on designing supervised deep semantic segmentation algorithms for vision tasks, there are many domains in which sufficient supervised pixel-level labels are difficult to obtain. In this…

Computer Vision and Pattern Recognition · Computer Science 2017-11-27 Xide Xia , Brian Kulis

In this paper, we present a new image segmentation method based on the concept of sparse subset selection. Starting with an over-segmentation, we adopt local spectral histogram features to encode the visual information of the small segments…

Computer Vision and Pattern Recognition · Computer Science 2018-04-10 Fariba Zohrizadeh , Mohsen Kheirandishfard , Farhad Kamangar