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We introduce a compressed suffix array representation that, on a text $T$ of length $n$ over an alphabet of size $\sigma$, can be built in $O(n)$ deterministic time, within $O(n\log\sigma)$ bits of working space, and counts the number of…

Data Structures and Algorithms · Computer Science 2017-09-05 J. Ian Munro , Gonzalo Navarro , Yakov Nekrich

Depth first search (DFS) tree is one of the most well-known data structures for designing efficient graph algorithms. Given an undirected graph $G=(V,E)$ with $n$ vertices and $m$ edges, the textbook algorithm takes $O(n+m)$ time to…

Data Structures and Algorithms · Computer Science 2018-02-21 Lijie Chen , Ran Duan , Ruosong Wang , Hanrui Zhang , Tianyi Zhang

Let G be a directed graph with n vertices and non-negative weights in its directed edges, embedded on a surface of genus g, and let f be an arbitrary face of G. We describe a randomized algorithm to preprocess the graph in O(gn log n) time…

Data Structures and Algorithms · Computer Science 2013-05-13 Sergio Cabello , Erin Wolf Chambers , Jeff Erickson

We consider the problem of estimating the conditional probability of a label in time $O(\log n)$, where $n$ is the number of possible labels. We analyze a natural reduction of this problem to a set of binary regression problems organized in…

Machine Learning · Computer Science 2009-06-04 Alina Beygelzimer , John Langford , Yuri Lifshits , Gregory Sorkin , Alex Strehl

The problem of learning a directed acyclic graph (DAG) up to Markov equivalence is equivalent to the problem of finding a permutation of the variables that induces the sparsest graph. Without additional assumptions, this task is known to be…

Methodology · Statistics 2020-11-10 Chandler Squires , Joshua Amaniampong , Caroline Uhler

In this paper we describe an algorithm that embeds a graph metric $(V,d_G)$ on an undirected weighted graph $G=(V,E)$ into a distribution of tree metrics $(T,D_T)$ such that for every pair $u,v\in V$, $d_G(u,v)\leq d_T(u,v)$ and…

Data Structures and Algorithms · Computer Science 2017-05-29 Guy E. Blelloch , Yan Gu , Yihan Sun

We present efficient data structures for submatrix maximum queries in Monge matrices and Monge partial matrices. For $n\times n$ Monge matrices, we give a data structure that requires O(n) space and answers submatrix maximum queries in…

Data Structures and Algorithms · Computer Science 2017-10-13 Pawel Gawrychowski , Shay Mozes , Oren Weimann

Over the last decade, there have been several data structures that, given a planar subdivision and a probability distribution over the plane, provide a way for answering point location queries that is fine-tuned for the distribution. All…

Computational Geometry · Computer Science 2012-11-01 John Iacono , Wolfgang Mulzer

Inspired by the classical fractional cascading technique, we introduce new techniques to speed up the following type of iterated search in 3D: The input is a graph $\mathbf{G}$ with bounded degree together with a set $H_v$ of 3D hyperplanes…

Computational Geometry · Computer Science 2025-04-11 Peyman Afshani , Yakov Nekrich , Frank Staals

We present a simple algorithm which maintains the topological order of a directed acyclic graph with n nodes under an online edge insertion sequence in O(n^{2.75}) time, independent of the number of edges m inserted. For dense DAGs, this is…

Data Structures and Algorithms · Computer Science 2007-05-23 Deepak Ajwani , Tobias Friedrich , Ulrich Meyer

By combining several interesting applications of random sampling in geometric algorithms like point location, linear programming, segment intersections, binary space partitioning, Clarkson and Shor \cite{CS89} developed a general framework…

Computational Geometry · Computer Science 2018-08-08 Sandeep Sen

Given access to the vertex set $V$ of a connected graph $G=(V,E)$ and an oracle that given two vertices $u,v\in V$, returns the shortest path distance between $u$ and $v$, how many queries are needed to reconstruct $E$? Firstly, we show…

Data Structures and Algorithms · Computer Science 2024-10-17 Paul Bastide , Carla Groenland

Learning the structure of Directed Acyclic Graphs (DAGs) presents a significant challenge due to the vast combinatorial search space of possible graphs, which scales exponentially with the number of nodes. Recent advancements have redefined…

Machine Learning · Computer Science 2024-11-01 Klea Ziu , Slavomír Hanzely , Loka Li , Kun Zhang , Martin Takáč , Dmitry Kamzolov

Let $\mathcal{P}$ be a set of $h$ pairwise-disjoint polygonal obstacles with a total of $n$ vertices in the plane. We consider the problem of building a data structure that can quickly compute an $L_1$ shortest obstacle-avoiding path…

Computational Geometry · Computer Science 2014-03-17 Danny Z. Chen , Rajasekhar Inkulu , Haitao Wang

We propose a dynamic data structure for the distribution-sensitive point location problem. Suppose that there is a fixed query distribution in $\mathbb{R}^2$, and we are given an oracle that can return in $O(1)$ time the probability of a…

Computational Geometry · Computer Science 2020-04-28 Siu-Wing Cheng , Man-Kit Lau

MAP is the problem of finding a most probable instantiation of a set of variables in a Bayesian network given some evidence. Unlike computing posterior probabilities, or MPE (a special case of MAP), the time and space complexity of…

Artificial Intelligence · Computer Science 2012-12-12 James D. Park , Adnan Darwiche

We propose an empirical Bayes formulation of the structure learning problem, where the prior specification assumes that all node variables have the same error variance, an assumption known to ensure the identifiability of the underlying…

Computation · Statistics 2023-08-17 Hyunwoong Chang , James Cai , Quan Zhou

This paper leverages the framework of algorithms-with-predictions to design data structures for two fundamental dynamic graph problems: incremental topological ordering and cycle detection. In these problems, the input is a directed graph…

Data Structures and Algorithms · Computer Science 2024-02-20 Samuel McCauley , Benjamin Moseley , Aidin Niaparast , Shikha Singh

Let $\mathcal{S}$ be a connected planar polygonal subdivision with $n$ edges that we want to preprocess for point-location queries, and where we are given the probability $\gamma_i$ that the query point lies in a polygon $P_i$ of…

Computational Geometry · Computer Science 2016-04-20 Boris Aronov , Mark de Berg , David Eppstein , Marcel Roeloffzen , Bettina Speckmann

In the Hausdorff Voronoi diagram of a set of clusters of points in the plane, the distance between a point t and a cluster P is the maximum Euclidean distance between t and a point in P. This diagram has direct applications in VLSI design.…

Computational Geometry · Computer Science 2013-12-17 Panagiotis Cheilaris , Elena Khramtcova , Evanthia Papadopoulou