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Far-UV circular dichroism (CD) spectroscopy provides a rapid, sensitive, nondestructive tool to analyze protein conformation by monitoring secondary structure composition. Originally intended for educational purposes, a spreadsheet-based…

Biomolecules · Quantitative Biology 2020-06-12 Luciano A. Abriata

In this paper we introduce WiNV - A framework for web-based interactive scalable network visualization. WiNV enables a new class of rich and scalable interactive cross-platform capabilities for visualizing large-scale networks natively in a…

Networking and Internet Architecture · Computer Science 2010-08-31 Hassan Gobjuka , Kamal Ahmat

This article introduces Unsub Extender, a free tool to help libraries analyze their Unsub data export files. Unsub is a collection development dashboard that gathers and forecasts journal-level usage metrics to provide academic libraries…

Digital Libraries · Computer Science 2022-10-26 Eric Schares

Phylogenetic trees are the primary framework for conveying evolutionary relationships. While many tools exist for visualizing phylogenetic trees, most are limited to static graphics, require coding expertise, or are developed for a specific…

Populations and Evolution · Quantitative Biology 2026-05-15 Zachary S. L. Foster , Jeff H. Chang , Niklaus J. Grunwald

This paper introduces PROOFTOOL, the graphical user interface for the General Architecture for Proof Theory (GAPT) framework. Its features are described with a focus not only on the visualization but also on the analysis and transformation…

Logic in Computer Science · Computer Science 2013-07-09 Cvetan Dunchev , Alexander Leitsch , Tomer Libal , Martin Riener , Mikheil Rukhaia , Daniel Weller , Bruno Woltzenlogel-Paleo

We introduce HexaLab: a WebGL application for real time visualization, exploration and assessment of hexahedral meshes. HexaLab can be used by simply opening www.hexalab.net. Our visualization tool targets both users and scholars.…

Graphics · Computer Science 2019-03-18 Matteo Bracci , Marco Tarini , Nico Pietroni , Marco Livesu , Paolo Cignoni

A probability density function (PDF) of a spatially dependent field provides a means of calculating moments of the field or, equivalently, the proportion of a spatial domain that is mapped to a given set of values. This paper describes a…

Fluid Dynamics · Physics 2025-01-10 Paul M. Mannix , David A. Ham , John Craske

The visualization of argumentation frameworks (AFs) is crucial for enabling a wide applicability of argumentative tools. However, their visualization is often considered only as an accompanying part of tools for computing semantics and…

Human-Computer Interaction · Computer Science 2024-09-10 Martin Nöllenburg , Christian Pirker , Anna Rapberger , Stefan Woltran , Jules Wulms

Graph layout is the process of creating a visual representation of a graph through a node-link diagram. Node-attribute graphs have additional data stored on the nodes which describe certain properties of the nodes called attributes. Typical…

Graphics · Computer Science 2017-12-18 Helen Gibson , Paul Vickers

We present a first attempt to design a quantum circuit for the determination of the parton content of the proton through the estimation of parton distribution functions (PDFs), in the context of high energy physics (HEP). The growing…

High Energy Physics - Phenomenology · Physics 2021-03-03 Adrián Pérez-Salinas , Juan Cruz-Martinez , Abdulla A. Alhajri , Stefano Carrazza

Recently, many systems for graph analysis have been developed to address the growing needs of both industry and academia to study complex graphs. Insight into the practical uses of graph analysis will allow future developments of such…

Social and Information Networks · Computer Science 2018-07-03 Tim Hegeman , Alexandru Iosup

This paper reports on a study of transferring a desktop-based model-based engineering tool to a web application. The study has been conducted in the WEBMODEL project where the well-established technology stack around the Eclipse platform…

Software Engineering · Computer Science 2023-03-01 Florian Hölzl , Simon Barner

Graph link prediction is an important task in cyber-security: relationships between entities within a computer network, such as users interacting with computers, or system libraries and the corresponding processes that use them, can provide…

Applications · Statistics 2022-08-10 Francesco Sanna Passino , Melissa J. M. Turcotte , Nicholas A. Heard

This paper describes the design and use of the graph-based parsing framework and toolkit UniParse, released as an open-source python software package. UniParse as a framework novelly streamlines research prototyping, development and…

Computation and Language · Computer Science 2018-07-12 Daniel Varab , Natalie Schluter

Graph representation learning (GRL) is to encode graph elements into informative vector representations, which can be used in downstream tasks for analyzing graph-structured data and has seen extensive applications in various domains.…

Machine Learning · Computer Science 2024-06-21 Hewen Wang , Renchi Yang , Xiaokui Xiao

In this paper, we discuss one approach for development and deployment of web sites (web pages) devoted to the description of objects (events) with a precisely delineated geographic scope. This article describes the usage of context-aware…

Computers and Society · Computer Science 2015-06-09 Dmitry Namiot , Manfred Sneps-Sneppe

In this contribution we discuss the main outcomes of our studies on the so called double parton distribution functions (dPDFs), accessible quantities in high energy proton-proton and proton nucleus collisions, in double parton scattering…

High Energy Physics - Phenomenology · Physics 2020-01-08 Matteo Rinaldi

Discovering causal relationships in complex socio-behavioral systems is challenging but essential for informed decision-making. We present Upload, PREprocess, Visualize, and Evaluate (UPREVE), a user-friendly web-based graphical user…

Machine Learning · Computer Science 2023-07-27 Suraj Jyothi Unni , Paras Sheth , Kaize Ding , Huan Liu , K. Selcuk Candan

There is a lot of data about mean sea level variation from studies conducted around the globe. This data is dispersed, lacks organization along with standardization, and in most cases, it is not available online. In some instances, when it…

Computers and Society · Computer Science 2024-02-08 Mihir Odhavji , Maria Alexandra Oliveira , João Nuno Silva

The Semantic Web offers access to a vast Web of interlinked information accessible via SPARQL endpoints. Such endpoints offer a well-defined interface to retrieve results for complex SPARQL queries. The computational load for processing…

Databases · Computer Science 2021-11-10 Christian Aebeloe , Ilkcan Keles , Gabriela Montoya , Katja Hose