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Development of fast methods to conduct in silico experiments using computational models of cellular signaling is a promising approach toward advances in personalized medicine. However, software-based cellular network simulation has…

Molecular Networks · Quantitative Biology 2018-11-20 Kevin Gilboy , Khaled Sayed , Niteesh Sundaram , Kara Bocan , Natasa Miskov-Zivanov

Performance increase with general-purpose processors has come to a halt. We can no longer depend on Moore's Law to increase computing performance. The only way to achieve higher performance or lower energy consumption is by building…

We present Proof-of-Perception (PoP), a tool-using framework that casts multimodal reasoning as an executable graph with explicit reliability guarantees. Each perception or logic node outputs a conformal set, yielding calibrated, stepwise…

Computer Vision and Pattern Recognition · Computer Science 2026-03-03 Arya Fayyazi , Haleh Akrami

Certification helps to increase trust in formal verification of safety-critical systems which require assurance on their correctness. In hardware model checking, a widely used formal verification technique, phase abstraction is considered…

Symbolic Computation · Computer Science 2024-05-08 Nils Froleyks , Emily Yu , Armin Biere , Keijo Heljanko

Teaching proofs is a crucial component of any undergraduate-level program that covers formal reasoning. We have developed a calculational reasoning format and refined it over several years of teaching a freshman-level course, "Logic and…

Logic in Computer Science · Computer Science 2023-11-16 Andrew T. Walter , Ankit Kumar , Panagiotis Manolios

The article presents the first results of a PhD study connected to testing of safety critical medical devices: a systematically executed case study at a Hungarian manufacturer of medical devices. The article shortly describes the process of…

Software Engineering · Computer Science 2014-04-29 Miklos Taliga

Probabilistic circuits (PCs) are a powerful modeling framework for representing tractable probability distributions over combinatorial spaces. In machine learning and probabilistic programming, one is often interested in understanding…

Data Structures and Algorithms · Computer Science 2021-12-10 Yash Pote , Kuldeep S. Meel

Among formal methods, the deductive verification approach allows establishing the strongest possible formal guarantees on critical software. The downside is the cost in terms of human effort required to design adequate formal specifications…

Software Engineering · Computer Science 2018-11-28 Sylvain Dailler , Claude Marché , Yannick Moy

Proof-carrying-code was proposed as a solution to ensure a trust relationship between two parties: a (heavyweight) analyzer and a (lightweight) checker. The analyzer verifies the conformance of a given application to a specified property…

Programming Languages · Computer Science 2018-08-06 Mohamed Nassim Seghir

The high-performance computing (HPC) community has adopted incentive structures to motivate reproducible research, with major conferences awarding badges to papers that meet reproducibility requirements. Yet, many papers do not meet such…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-09-01 Valérie Hayot-Sasson , Nathaniel Hudson , André Bauer , Maxime Gonthier , Ian Foster , Kyle Chard

Proofs of Concept (PoCs) are widely adopted practices in software engineering. Despite their relevance, PoCs remain conceptually underdefined and methodologically ad hoc in both research and industry, with definitions and implementation…

Software Engineering · Computer Science 2026-04-08 Bruno Fernando Antognolli , Fabio Petrillo

We apply the foundational proof certificate (FPC) framework to the problem of designing high-level outlines of proofs. The FPC framework provides a means to formally define and check a wide range of proof evidence. A focused proof system is…

Logic in Computer Science · Computer Science 2015-11-16 Roberto Blanco , Dale Miller

We develop and prove sound a concurrent separation logic for Pthreads-style barriers. Although Pthreads barriers are widely used in systems, and separation logic is widely used for verification, there has not been any effort to combine the…

Logic in Computer Science · Computer Science 2015-07-01 Aquinas Hobor , Cristian Gherghina

Pseudo-random number generators (PRNGs) are widely used in modern computing and are expected to exhibit excellent statistical performance and repeatability. This study evaluates and compares modern PRNGs used in high performance computing…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-05-19 Théau Wartel , David R. C. Hill

We introduce an algorithm for detection of bugs in sequential circuits. This algorithm is incomplete i.e. its failure to find a bug breaking a property P does not imply that P holds. The appeal of incomplete algorithms is that they scale…

Logic in Computer Science · Computer Science 2013-09-26 Eugene Goldberg , Mitesh Jain , Panagiotis Manolios

We point out the need to use probability amplitudes rather than probabilities to model evidence accumulation in decision processes involving real physical sensors. Optical information processing systems are given as typical examples of…

Artificial Intelligence · Computer Science 2013-04-05 A. J. Hanson

Reachability Logic is a formalism that can be used, among others, for expressing partial-correctness properties of transition systems. In this paper we present three proof systems for this formalism, all of which are sound and complete and…

Logic in Computer Science · Computer Science 2019-09-05 Vlad Rusu , David Nowak

Quantum computation is an emerging technology that promises to be a powerful tool in many areas. Though some years likely still remain until significant quantum advantage is demonstrated, the development of the technology has led to a range…

Emerging Technologies · Computer Science 2020-12-04 James R. Wootton

Modern society is getting accustomed to the Internet of Things (IoT) and Cyber-Physical Systems (CPS) for a variety of applications that involves security-critical user data and information transfers. In the lower end of the spectrum, these…

Cryptography and Security · Computer Science 2023-05-08 Avani Dave Nilanjan Banerjee Chintan Patel

Real-time simulation methods for investigations on electric networks and integration of grid connected generation units are increasingly in the focus of ongoing research areas. While laboratory testing methods are the predominant method for…

Systems and Control · Computer Science 2018-12-27 Georg Lauss , Filip Pröstl Andrén , Fabian Leimgruber , Thomas I. Strasser