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In this paper, we consider the problem of efficiently representing a set $S$ of $n$ items out of a universe $U=\{0,...,u-1\}$ while supporting a number of operations on it. Let $G=g_1...g_n$ be the gap stream associated with $S$, $gap$ its…

Data Structures and Algorithms · Computer Science 2015-05-15 Nicola Prezza

We show that the compressed suffix array and the compressed suffix tree for a string of length $n$ over an integer alphabet of size $\sigma\leq n$ can both be built in $O(n)$ (randomized) time using only $O(n\log\sigma)$ bits of working…

Data Structures and Algorithms · Computer Science 2016-05-24 Djamal Belazzougui

Re-Pair is an effective grammar-based compression scheme achieving strong compression rates in practice. Let $n$, $\sigma$, and $d$ be the text length, alphabet size, and dictionary size of the final grammar, respectively. In their original…

Data Structures and Algorithms · Computer Science 2016-11-07 Philip Bille , Inge Li Gørtz , Nicola Prezza

We propose a method to improve traditional character-based PPM text compression algorithms. Consider a text file as a sequence of alternating words and non-words, the basic idea of our algorithm is to encode non-words and prefixes of words…

Information Theory · Computer Science 2015-03-17 Yichuan Hu , Jianzhong , Zhang , Farooq Khan , Ying Li

This paper describes a new method of data encoding which may be used in various modern digital, computer and telecommunication systems and devices. The method permits the compression of data for storage or transmission, allowing the exact…

Information Theory · Computer Science 2012-01-27 Igor Nesiolovskiy , Artem Nesiolovskiy

Given a set of strings, the shortest common superstring problem is to find the shortest possible string that contains all the input strings. The problem is NP-hard, but a lot of work has gone into designing approximation algorithms for…

Data Structures and Algorithms · Computer Science 2019-12-04 Jarno Alanko , Tuukka Norri

Data compression has become a necessity not only the in the field of communication but also in various scientific experiments. The data that is being received is more and the processing time required has also become more. A significant…

Information Theory · Computer Science 2016-07-29 Gautam R , S Murali

A prescription to calculate the minimum number of bits needed for binary strip detector readout is presented. This permits a systematic analysis of the readout efficiency relative to this theoretical minimum number of bits. Different level…

Instrumentation and Detectors · Physics 2015-06-17 Maurice Garcia-Sciveres , Xinkang Wang

Indexing highly repetitive texts - such as genomic databases, software repositories and versioned text collections - has become an important problem since the turn of the millennium. A relevant compressibility measure for repetitive texts…

Data Structures and Algorithms · Computer Science 2020-12-17 Travis Gagie , Gonzalo Navarro , Nicola Prezza

We show an asymptotic 2/3-competitive strategy for the bin covering problem using O(b+log n) bits of advice, where b is the number of bits used to encode a rational value and n is the length of the input sequence.

Data Structures and Algorithms · Computer Science 2023-09-26 Andrej Brodnik , Bengt J. Nilsson , Gordana Vujovic

We consider the problem of constructing prefix-free codes in which a designated symbol, a space, can only appear at the end of codewords. We provide a linear-time algorithm to construct almost-optimal codes with this property, meaning that…

Information Theory · Computer Science 2024-05-13 Roberto Bruno , Ugo Vaccaro

We prove that to store n bits x so that each prefix-sum query Sum(i) := sum_{k < i} x_k can be answered by non-adaptively probing q cells of log n bits, one needs memory > n + n/log^{O(q)} n. Our bound matches a recent upper bound of n +…

Computational Complexity · Computer Science 2009-06-09 Emanuele Viola

We present a new variable-length computation-friendly encoding scheme, named SFDC (Succinct Format with Direct aCcesibility), that supports direct and fast accessibility to any element of the compressed sequence and achieves compression…

Data Structures and Algorithms · Computer Science 2023-04-03 Domenico Cantone , Simone Faro

Many search engines such as Google, Bing & Yahoo! show search suggestions when users enter search phrases on their interfaces. These suggestions are meant to assist the user in finding what she wants quickly and also suggesting common…

Data Structures and Algorithms · Computer Science 2021-11-01 Dhruv Matani

In this paper we present an application of a simple technique of local recompression, previously developed by the author in the context of compressed membership problems and compressed pattern matching, to word equations. The technique is…

Formal Languages and Automata Theory · Computer Science 2014-03-19 Artur Jeż

We consider the problem of encoding two-dimensional arrays, whose elements come from a total order, for answering \topk{} queries. The aim is to obtain encodings that use space close to the information-theoretic lower bound, which can be…

Data Structures and Algorithms · Computer Science 2021-07-13 Seungbum Jo , Srinivasa Rao Satti

Given a string $S$, the \emph{compressed indexing problem} is to preprocess $S$ into a compressed representation that supports fast \emph{substring queries}. The goal is to use little space relative to the compressed size of $S$ while…

Data Structures and Algorithms · Computer Science 2018-01-10 Philip Bille , Mikko Berggren Ettienne , Inge Li Gørtz , Hjalte Wedel Vildhøj

Pattern matching is the most central task for text indices. Most recent indices leverage compression techniques to make pattern matching feasible for massive but highly-compressible datasets. Within this kind of indices, we propose a new…

Data Structures and Algorithms · Computer Science 2021-05-31 Tooru Akagi , Dominik Köppl , Yuto Nakashima , Shunsuke Inenaga , Hideo Bannai , Masayuki Takeda

The metric sketching problem is defined as follows. Given a metric on $n$ points, and $\epsilon>0$, we wish to produce a small size data structure (sketch) that, given any pair of point indices, recovers the distance between the points up…

Computational Geometry · Computer Science 2016-11-30 Piotr Indyk , Tal Wagner

In a recent breakthrough, Paz and Schwartzman (SODA'17) presented a single-pass ($2+\epsilon$)-approximation algorithm for the maximum weight matching problem in the semi-streaming model. Their algorithm uses $O(n\log^2 n)$ bits of space,…

Data Structures and Algorithms · Computer Science 2019-01-01 Mohsen Ghaffari , David Wajc